KEGG   Variovorax paradoxus EPS: Varpa_3342
Entry
Varpa_3342        CDS       T01392                                 
Name
(GenBank) 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
  KO
K01770  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00900  Terpenoid backbone biosynthesis
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    Varpa_3342
Enzymes [BR:vpe01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.12  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
     Varpa_3342
SSDB
Motif
Pfam: YgbB
Other DBs
NCBI-ProteinID: ADU37527
UniProt: E6UV15
Position
complement(3599045..3599539)
AA seq 164 aa
MTSSAPFNIRVGEGWDVHQLVAGRKLILGGIEVPHTTGLLGHSDADVLLHAITDALLGGA
GLGDIGRHFPDTDVQFRGADSAVLLAEAARRVRAAGWEIGNVDSTVIAQAPKLAPHIPLM
CQRIADTLGIALDQVNVKAKTAEKLGPVGEGRAMEARAAVLLHR
NT seq 495 nt   +upstreamnt  +downstreamnt
atgacgtcatctgcacccttcaacattcgcgtcggcgagggctgggacgttcaccagctc
gtggcggggcgcaagctcatcctgggcggcatcgaggtaccgcatacgaccggcctgctg
gggcattcggacgcagacgtgctgctgcacgcgatcaccgatgcgctgctcggcggtgcc
ggactcggtgatatcggccggcactttcccgacaccgacgtgcagttccgcggggccgat
tcagcggtgctgctggccgaagcggcacgccgcgtgcgggccgccggctgggagatcggc
aacgtcgacagcaccgtgatcgcgcaggcgccgaagctggcgccgcacattccgctcatg
tgccagcgcatcgcggacaccctgggcatcgcgctagatcaggtcaacgtgaaggccaag
acggccgagaagctcggcccggtgggcgagggccgcgcgatggaagcgcgcgcggccgtt
ctgctccaccgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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