KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_05535
Entry
M634_05535        CDS       T02761                                 
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03030  DNA replication
vpf03430  Mismatch repair
vpf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M634_05535
   03430 Mismatch repair
    M634_05535
   03440 Homologous recombination
    M634_05535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpf03032]
    M634_05535
   03400 DNA repair and recombination proteins [BR:vpf03400]
    M634_05535
Enzymes [BR:vpf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M634_05535
DNA replication proteins [BR:vpf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     M634_05535
DNA repair and recombination proteins [BR:vpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     M634_05535
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C SAS4 DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: AGQ92011
Position
I:complement(1142555..1143574)
AA seq 339 aa
MRIYADKLADHLAKHLKQVYLIFGNEPLLIQESRQAIQKTALQHGFEERHRFAVDASLDW
NQVYDCFQALSLFSSRQLIELEIPESGVTTAISKELQTLCDMLHDDIMLVIIGTKLTKAQ
ENAKWFKALNTKGDWVSCLTPDLQRLPMFVQTRCRALGLKPDQQSLQMLAQWHEGNLFAL
SQSLEKLALLYPDGELTVVRLEEALSRNNHFTTFNWIDALLAGKANRAQRILRQLEAEGI
ETVILIRSVQKEFNQLLSMHQDLTQMSISQVFEKYRVWQNKRPLYNAALMRLSASRICAL
ISLLAQAEIKAKTQYDESVWPTIHQLSLESCSPDIKLAI
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcgaatttatgctgacaagctagctgaccatctagccaaacacttaaagcaggtttat
ctgatcttcggaaacgaaccgctactgatccaagaaagccgccaagcgattcaaaaaacc
gctctacaacatggttttgaagaaagacaccgttttgctgtcgatgcaagtttagattgg
aaccaagtgtatgactgctttcaagctctgagcttattttctagtcgacaactcattgag
cttgagatcccagaaagcggtgtcaccacagccatcagcaaagagctacagactctgtgt
gacatgttgcatgatgacatcatgctagtgatcatcggaacgaagctgactaaagcgcaa
gaaaatgccaaatggtttaaagcactgaataccaaaggcgattgggtcagctgcttaacg
ccggatcttcagcgtttgcctatgtttgtgcaaacgcgctgccgcgcattaggtttaaag
cccgatcagcaatccttacagatgttggcacagtggcatgaaggcaacttatttgcactt
tctcagagtctagagaaactggctttgctctatcctgatggcgaactgactgttgtacgc
ttagaggaagccttaagtcgaaacaaccactttacgacgtttaattggattgatgcgtta
cttgcaggtaaagctaatcgtgctcaacgcatcctgcgtcaattagaagccgaaggcatt
gaaacggtcattctcatccgaagtgtgcagaaagagttcaatcaactattaagcatgcat
caagatctgactcaaatgtcgattagccaagtctttgagaagtatcgcgtttggcaaaat
aaacgtccgctttataacgccgcgttaatgcgcttatcagcaagccgtatttgcgcccta
atctccttgcttgcgcaagctgagattaaagccaaaacccagtatgacgagtccgtctgg
ccaactattcatcaattgagcttagaaagctgctctcctgatattaagctggcaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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