KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_12735
Entry
M634_12735        CDS       T02761                                 
Name
(GenBank) endonuclease IV
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    M634_12735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpf03400]
    M634_12735
Enzymes [BR:vpf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M634_12735
DNA repair and recombination proteins [BR:vpf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     M634_12735
 Prokaryotic type
     M634_12735
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: AGQ91306
Position
I:2647469..2648119
AA seq 216 aa
MNKEKRIEILERLRENNPNPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVANT
PQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRDALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWLI
LHGRYTCLARKPRCGSCIIEDLCEYSPPKENVKKAK
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaacaaagaaaaaagaatagaaattcttgaacgattaagagaaaacaaccccaatcct
gaaacggaactgaactggagctctccatttgagttactcatcgctgtgctactttcagcg
caagcgaccgatgtcagtgtcaacaaagccactgataaactcttccccgttgcgaatacg
ccacaaagtattctcgatttgggtgtcgatggtttgaaggaatacatcaaaactattggc
ctgtttaactcaaaagcagaaaacaccatcaaaacctgtaagatcttattagaaaaacat
aatggcgaagtgcctgaagatcgcgacgctcttgaagctcttccaggagtcggccgtaag
accgccaatgtcgtgctcaacaccgcatttggttggccaaccattgccgtcgatacgcac
atttatcgcgtttcgaatcgtactaagtttgcgatgggaaaaacggtagatgatgtcgaa
caaaaactattaaaagtggtaccaaaagagttcaaactcgatgtacaccactggttaatt
cttcatggtcgctacacttgtttagcgagaaagcctcgctgtggaagctgcattattgaa
gatttgtgcgaatactctccaccaaaagaaaatgtaaagaaagcaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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