KEGG   Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_20180
Entry
M634_20180        CDS       T02761                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
vpf  Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00550  Peptidoglycan biosynthesis
vpf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vpf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    M634_20180
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vpf01002]
    M634_20180
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpf01011]
    M634_20180
Enzymes [BR:vpf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     M634_20180
Peptidases and inhibitors [BR:vpf01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   M634_20180
Peptidoglycan biosynthesis and degradation proteins [BR:vpf01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   M634_20180
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase Peptidase_S13
Other DBs
NCBI-ProteinID: AGQ93151
Position
II:870500..871669
AA seq 389 aa
MRKITLFNTTFLTGFATFSHFAFAAPTVVPNAPELSSRGYVLMDYHTGKVLVERDAEKRL
NPASLTKLMTAYVAGQEVNAGNISLDDQVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLY
RGLVVQSGNDASVAIAEHVAGSEAGFVSLMNSWASQLGLTNSSFTNPHGLDSDGLYSTPH
DIAKLGQAIIRDLPDIYPMYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYS
LATSATNGDMRLIAVVMGAKSQSVRESESKQLLSYGFRFYETLMPTAAGTDIANARVWMG
QKDELKVGVNRDVYLTLPKSDLNKLKAEVEYNGDLLAPIAQDQVVGKVLYKVDGKVVKET
ELVALESVEEGGIFKRIMDWFKRLVASWF
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgagaaaaattaccttattcaacacgactttccttaccggcttcgctaccttctctcac
tttgcctttgctgcaccaactgttgtccctaatgcacctgaattaagctctcgcggttat
gtactgatggactatcacacaggtaaagtgttggtagagcgcgatgcagagaagcgatta
aaccctgcgagcttaactaagttgatgactgcttatgttgcaggacaagaagtaaacgct
ggcaatataagtctcgatgatcaagttgtcattagtcgcaacgcttgggcgaaaaacttc
ccagattcttccaaaatgttcatcgaagtaaacacatctgtgtctctgtctgatttatat
cgaggattggtggttcagtcaggaaatgatgctagtgttgccattgcagagcacgtcgct
ggcagcgaagcaggctttgttagcttaatgaatagttgggcgagtcaacttggtttgacg
aactcctcatttactaaccctcacggtttagatagcgatggtttgtattcaacaccgcat
gatatagctaagttgggtcaagcaatcattcgtgatctgccagatatttatccgatgtac
agtgaaacgtcttttacgtacaacggtattactcaatataaccggaatggcttacttcgt
gatcgcagcatgaacgttgacgggatgaaaacgggctataccagtggtgcaggttacagt
ttggcgacgtcagccaccaatggtgacatgcgccttatcgcagttgttatgggggcgaag
agccaaagtgtgcgtgaatcagaaagtaagcaacttcttagttacggttttcgattctac
gagaccttgatgccaacggccgcaggaactgatatcgcaaacgctcgcgtttggatgggg
caaaaggatgagttaaaagttggtgtgaaccgtgatgtttatcttactctgcctaaaagt
gacttaaacaaacttaaagcggaagtggaatacaacggtgatttacttgcgccaattgct
caagatcaggtagttggcaaggtgctatacaaagtggatggaaaagtcgtgaaggagacc
gagctagttgcactcgaatcagtggaagaaggtgggatttttaaacgtattatggattgg
tttaagcgactggtagcaagctggttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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