KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_10970
Entry
M636_10970        CDS       T02760                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpk03016]
    M636_10970 (truA)
Enzymes [BR:vpk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     M636_10970 (truA)
Transfer RNA biogenesis [BR:vpk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    M636_10970 (truA)
 Prokaryotic type
    M636_10970 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AGQ97937
Position
I:588738..589532
AA seq 264 aa
MRIALGIEYNGTNYFGWQRQREVKSVQEELEKALSIVANHPVEVQCAGRTDAGVHGTGQV
VHFDTNVNRKMVAWTMGANANMPSDIAVRWAKEVPDDFHARFSATARRYRYIIFNHALRP
GILNSGVSHYHGELDEKKMHEAGQYLLGENDFSSFRAAHCQSLSPCRNLMHLNVTRHGDY
VVIDIKANAFVHHMVRNITGSLIKVGRGEEKPEWIKWLLEAKDRKLAGATAKAEGLYLVD
VDYPEEFELPCVPIGPLFLPDNLN
NT seq 795 nt   +upstreamnt  +downstreamnt
atgagaatcgcattaggtatcgaatacaacggtacaaattattttggttggcaacgccaa
agagaagtgaaaagtgttcaagaagaactagagaaagcgttgtccatcgttgcgaaccac
cctgtcgaagtgcagtgtgcaggtcgtactgatgcgggtgtacatggtacgggacaagtt
gttcactttgataccaacgttaatcgaaaaatggtggcttggacgatgggcgcaaatgcg
aacatgccaagtgacatcgctgttcgctgggcaaaagaagttcctgatgacttccacgcg
cgattctcagcaacagcgcgtcgttaccgctacatcatttttaatcacgcattgcgccca
ggcattttgaactcgggtgtgagccattatcacggcgagctagatgaaaagaaaatgcat
gaagccgggcaatatttgttaggtgaaaatgacttttcatcattccgtgcagcgcattgt
cagtcgttgagtccgtgccgtaatttgatgcacctaaacgtcactcgtcatggtgattat
gttgttatcgacattaaagcgaacgcgttcgttcatcacatggttcgaaacatcacaggt
agcctgattaaagtcggtcgtggtgaagaaaaaccagagtggatcaagtggttgcttgag
gcaaaagatcgcaaacttgcaggtgcaacagcgaaggctgaaggtttgtacttagtcgat
gtcgattatccagaagaatttgaattgccttgcgtgccgatcggtccgctgtttttgcca
gataatttgaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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