KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_16240
Entry
M636_16240        CDS       T02760                                 
Name
(GenBank) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    M636_16240
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vpk01007]
    M636_16240
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpk03016]
    M636_16240
Enzymes [BR:vpk01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     M636_16240
Amino acid related enzymes [BR:vpk01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   M636_16240
Transfer RNA biogenesis [BR:vpk03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    M636_16240
 Prokaryotic type
    M636_16240
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N TMF_TATA_bd Spectrin PCRF FapA Thump_like DUF3086 ERM_helical Exo84_C CCDC138_cc
Other DBs
NCBI-ProteinID: AGR00188
Position
I:complement(1727985..1729292)
AA seq 435 aa
MLDSKLLRTELDETAAKLARRGFKLDVETIRKLEEQRKSIQVEVENLQSTRNSISKQIGQ
KMAAGDKEGAEEIKKQIGTLGSDLDAKKVELEQVMAQLDEFTLSVPNIPADEVPDGKDEN
DNVEIYRWGEPKTYDFDLKDHVDLGEMGGGLDFASAVKITGARFIVMKGQFARLHRAIAQ
FMLDLHTEEHGYTEMYVPYLVNSDSLFGTGQLPKFGKDLFHTEPLAEKVNDEEPRKLSLI
PTAEVPVTNLVRDTITDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TKPEDSMNALEELTGHAEKVLQLLELPYRKVVLCTGDMGFGARKTYDLEVWVPAQETYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI
PAVLQKYMGGATHIG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgctggattctaaattacttcgtacagagctggatgaaacagctgctaaactggcgcgt
cgtggctttaagctagacgtagagactattcgtaaacttgaagaacaacgtaagtccatt
caagtagaagtagaaaatttacaatccacgcgtaactccatctccaagcaaattggccaa
aaaatggcggctggcgataaagaaggcgcagaagagatcaagaaacaaatcggtactcta
ggtagcgatcttgacgcgaagaaagttgaacttgagcaagtaatggctcaactagacgaa
ttcacgctttctgtaccaaacatcccagcagatgaagtgccagatggcaaagacgaaaat
gacaacgttgaaatctatcgttggggtgagcctaagacttacgacttcgatttgaaagac
cacgttgacctaggcgaaatgggtggcggtctagacttcgcaagtgcagttaagatcact
ggcgcacgtttcatcgtgatgaaaggtcaatttgctcgtctacaccgtgcaattgctcag
ttcatgctagatcttcatacagaagaacatggctacacagagatgtacgtaccttaccta
gtgaactctgacagcctattcggtactggtcagcttcctaagttcggtaaagatcttttc
cacactgagcctctagcggaaaaagtaaacgacgaagagccacgtaaactgtctctaatc
cctacagcagaagtaccagtaacgaacctagttcgtgacactatcactgacgaagcggat
ctacctatcaagatgacagcacacacgccatgtttccgttcagaagcgggttcatacggt
cgtgatactcgtggtctgattcgtatgcaccagttcgacaaagttgagctagtacaaatc
acgaagccagaagattcaatgaacgcgctagaagagctaacaggtcacgctgagaaagtt
ctacaacttcttgaacttccttaccgtaaagtcgttctatgtacaggcgacatgggcttc
ggcgctcgtaaaacttacgacctagaagtttgggttcctgctcaagaaacttaccgtgaa
atctcttcatgttctaacatgtgggacttccaagctcgtcgtatgcaagcgcgtttccgt
cgtaaaggtgagaagaaacctgagcttgtacacacgctaaacggttctggtctagcagtt
ggtcgtaccatggttgctatcctagaaaacaaccaagaagcagacggtcgcattgcaatc
cctgcagtacttcagaagtacatgggcggcgcaacgcacatcggttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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