KEGG   Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_16635
Entry
M636_16635        CDS       T02760                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
vpk  Vibrio parahaemolyticus O1:K33 CDC_K4557
Brite
KEGG Orthology (KO) [BR:vpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpk03009]
    M636_16635
Enzymes [BR:vpk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     M636_16635
Ribosome biogenesis [BR:vpk03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    M636_16635
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AGQ98781
Position
I:1816713..1817411
AA seq 232 aa
MSSRTGHEKGRRTSQSKTGHFKRSGKPNRVEDQTTRRHPTRTAKANKPRVDLQNRKVIIF
NKPYDTLSQFTDGDGRKTLADYIPVKDVYAAGRLDRDSEGLMVLTNDGILQAKLTQPKSK
SPKTYWVQVDGAPQEQDLEKLRKGVELKDGMTLPAKVEVIDAPTIWERNPPVRFRANIPT
TWLAITIIEGRNRQVRRMTAHIGFPTLRLVRYSMGDITLGDLQPGQWKEIQL
NT seq 699 nt   +upstreamnt  +downstreamnt
atgtcatctcgcacaggtcatgaaaaagggcgtcgtaccagccaatctaaaacaggccat
tttaaacgttccggtaaaccaaaccgtgtagaggatcaaaccacaagacgccaccctact
cgcacagccaaagccaataaacctcgagtcgacctgcaaaatagaaaagtcattattttc
aataagccttacgatacgctgagccaatttaccgatggtgacggccgtaaaacattggct
gactacattccagtaaaagacgtatacgcagcaggtcgactagatagagacagtgaaggc
ctaatggtgttaaccaatgatggtatcctgcaagcgaagctgactcagccgaaatcaaag
tcgccgaaaacgtattgggtacaggtggatggagcgccacaagagcaagatttagagaag
ttgcgtaaaggcgttgaattaaaagatggtatgaccttacccgcaaaagtagaagtcatt
gatgctccgacgatttgggagagaaacccaccagttcgttttcgtgcaaatattccaacg
acatggttagcaatcactatcattgaaggtagaaaccgccaagtaagacgcatgaccgct
catatcggtttcccaactttacgcttagtacgctattcaatgggcgacattacccttgga
gacttgcagcctggccaatggaaagagattcagctctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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