KEGG   Virgibacillus dokdonensis: A21D_01872
Entry
A21D_01872        CDS       T05261                                 
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
  KO
K10979  DNA end-binding protein Ku
Organism
vpn  Virgibacillus dokdonensis
Pathway
vpn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A21D_01872 (ykoV)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpn03400]
    A21D_01872 (ykoV)
DNA repair and recombination proteins [BR:vpn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A21D_01872 (ykoV)
SSDB
Motif
Pfam: Ku STAT_int CDC24_OB3 Prok-RING_4 Rad50_zn_hook
Other DBs
NCBI-ProteinID: AUJ24953
UniProt: A0A2K9J1P8
Position
2013309..2014160
AA seq 283 aa
MHTMWKGTISFGLVNIPVKMHAATENKDIKLRQLHKECQSPIKYERSCPVCDRPVENEEI
VKAYEYAKNKFVVLDEEELEALKQEQADKAVEIMDFVQLAEVDPIYYEKSYFLSPNEGGA
KAYGLLRKALKETGKIGIAKMMIRSKEQLAIIRVYEDTLVVETIHYPDEVRRIEDVPNIP
KEVETDPQALDTAKMLIDQLSTTFEPTKYKDEYRHALLDLIEQKKANEQTATAQDKPSPD
AATNLMDALQASLERAKQEKPKPKQPSLTKEKEKKIKKKKTGT
NT seq 852 nt   +upstreamnt  +downstreamnt
atgcatacgatgtggaaaggaacgattagctttgggcttgtaaatattcctgtgaaaatg
catgcggcaactgaaaataaagatattaaattaaggcaattgcataaggaatgtcaatca
ccgattaaatatgaacggtcatgtcctgtatgcgaccggccagtagaaaatgaagaaatt
gtgaaagcatatgaatatgcaaagaataaattcgttgtgttagatgaggaagagttagaa
gcattaaagcaagaacaggcggataaagcggtcgaaatcatggactttgtgcagttggct
gaagtagatccaatttattatgagaaaagttattttttatcgccgaatgaaggcggagcg
aaagcctacggacttttacgaaaggctttgaaagagactggaaaaatcggcattgcgaaa
atgatgattcgttctaaagaacaattggcaattattcgtgtctatgaggacacactagtt
gtggaaaccatacattatccagatgaagtgcgtcgtattgaagatgtgcctaacatacca
aaggaagtggaaacagatcctcaagcattagatacagcaaagatgctcattgatcagtta
tcaacgacgtttgaaccgacaaaatacaaagacgagtatcgccatgcattgctagactta
attgaacaaaagaaagctaacgagcaaacggcgacagcacaagataagccttcccctgat
gcagctacaaacttgatggatgctttacaagcttcgttagagcgtgcaaaacaagaaaag
ccgaaaccaaaacaaccatcgctcaccaaagaaaaggaaaaaaagataaagaagaagaaa
acgggaacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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