KEGG   Vanderwaltozyma polyspora: Kpol_1032p49
Entry
Kpol_1032p49      CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K13126  polyadenylate-binding protein
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03015  mRNA surveillance pathway
vpo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Kpol_1032p49
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kpol_1032p49
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1032p49
   03041 Spliceosome [BR:vpo03041]
    Kpol_1032p49
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     Kpol_1032p49
   mRNA cycle factors
    Stress granule specific factors
     Kpol_1032p49
Spliceosome [BR:vpo03041]
 Complex C
  Other components
   Complex C specific factors
    Kpol_1032p49
SSDB
Motif
Pfam: RRM_1 PABP RRM_7 RRM_3 RRM_occluded YflT FAM192A_Fyv6_N
Other DBs
NCBI-GeneID: 5546743
NCBI-ProteinID: XP_001646313
UniProt: A7TH03
AA seq 580 aa
MSDITEKTTEQLEKLSLQEQPASQEESSSGSAAEVSSASNGGNSGTAVDSASLYVGELDP
SVSEALLYDIFSPIGPVSSIRVCRDAVTKTSLGYAYVNFNDHDSGKVAIEKLNYTPIKGK
PCRIMWSQRDPSMRKNGSGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDETGKSKG
FGFVHFEEDTAASEAIDAINGMMLNGLEVYVAAHVSRKDRESKFEAAKANFTNVYVKNVD
LEATEEEFEELFKKFGPITSISMEKDSEGKFRGFGFVNYENHESAAKAVDELNDLEFKSQ
KLYVGRAQKKYERLQELKKQYEEAKLEKMAKYQGVNLFVKNLDDTIDDELLKKEFESFGT
ITSVKVMRNETGKSKGFGFVCFSSPEEATRAITEKNQQIVAGKPLYVALAQRKDVRRSQL
AQQIQARNQMRYQQATAAAAAAAAGIPGQFMQPMFYGVMPPRGVPFNGANPQQFAGMPPQ
QFRNGAPVYAGMPPQGAGAPPRNDQFFAQQNQRQALGEELYKKVSAKTSDEEAAGKITGM
ILDLPPQEVMPLLENDELFEQHFKEAFAAYESFKKEQQQA
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgtctgatattactgaaaagactactgaacaattggagaagttgagtttgcaagaacaa
cctgcttctcaggaggaatccagttctggttctgctgccgaggtctcatctgcttccaat
ggcggtaactctggcactgctgtcgactctgcctctttatacgtcggtgaactagatcct
tctgtctcagaagcattgttgtatgatatcttctcaccaattggccctgtttcttctatc
cgtgtctgtagggatgctgtcaccaagacttctttgggttacgcctatgtcaacttcaat
gatcatgattcaggtaaagtcgccatcgaaaagttgaattacactcctatcaagggtaag
ccttgtcgtattatgtggtcccaacgtgatccttccatgagaaagaacggttcaggtaat
atcttcatcaagaacttacatgctgacatcgataacaaggctttacacgataccttctcc
gtctttggtaacattttatcttgtaagattgctactgatgaaactggtaagtctaaaggt
tttggtttcgtccatttcgaagaagacaccgctgcgtcagaagctatcgatgccattaac
ggtatgatgttgaacggtttggaagtttacgtcgctgctcacgtatcaagaaaggaccgt
gaatccaagttcgaagctgccaaggctaacttcaccaacgtttacgttaaaaacgtagat
ctagaagccaccgaggaagaattcgaagagttattcaagaaattcggcccaattacttcc
atctccatggaaaaggactctgaaggcaaattcagaggtttcggtttcgtcaactacgaa
aaccacgaatctgccgctaaagcagtcgatgaattaaacgatttggaattcaagtctcaa
aaattatacgtcggtagagcccaaaagaaatacgaacgtttacaagaattaaagaagcaa
tacgaagaagccaagctagaaaagatggccaaataccaaggtgttaacttgttcgtcaag
aacttggatgacaccatcgatgatgaattgttgaagaaggaattcgaatccttcggaacc
atcacttctgtcaaagtcatgagaaatgaaactggtaaatctaaaggtttcggtttcgtt
tgtttctcttccccagaagaagctaccagagctatcactgaaaagaaccaacaaatcgtc
gccggcaagccattgtacgttgctttggctcaaagaaaagacgtcagacgttctcaattg
gctcaacaaatccaagccagaaaccaaatgagataccaacaagctactgctgctgctgcc
gctgccgccgccggtatcccaggtcaattcatgcaaccaatgttttacggtgtcatgcca
ccaagaggtgtcccattcaatggcgctaacccacaacaatttgctggtatgcctccacaa
caatttagaaatggtgctccagtttatgctggtatgccaccacaaggtgctggtgctcca
ccaagaaatgaccaattttttgctcaacaaaaccaaagacaagctttgggtgaagaatta
tacaagaaagtttctgcaaagacatccgatgaagaagctgctggtaagattacaggtatg
atcttagacttaccaccacaagaagtcatgcctttgttggaaaatgatgaattgtttgaa
caacacttcaaggaagcctttgctgcttacgaatctttcaaaaaggaacaacaacaagct
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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