KEGG   Vanderwaltozyma polyspora: Kpol_1040p14
Entry
Kpol_1040p14      CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kpol_1040p14
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1040p14
Enzymes [BR:vpo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     Kpol_1040p14
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Kpol_1040p14
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Kpol_1040p14
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1
Other DBs
NCBI-GeneID: 5543898
NCBI-ProteinID: XP_001643659
UniProt: A7TPK9
AA seq 784 aa
MNNPSVLGYPSLSSQPAGPQRTVTPNAMGAQLHTPPGLMSAGGNDYSIQLLQQLNNSNNN
NNNNNNNNNNNNNNTNVQSLPPDENINNPLFHPHLEDPSLLSNPIWKLQLQLISISMQTL
GQPNVYARQNAMKKYLVTQKQPSQNGGNHVANNNGNGMNSNNNNGNGNPQLNEASMSLVD
KTKQLLMEMASDTPNSNDLSNDIKNSSSQQQGQQNNTNSTNSTISTPTTPKTELNQLSST
PTTTSLLLQHKKLSQYNIDEDDEVEQQNRIITPDEVKFNDQLWHAIDLSNLKIFNVNNRI
FDYKFLTRLYLNGNNLTSLPKEIKKLNNIRVLDLSHNKLTELPTELGFCYQLKYLYLFDN
LIKTLPWEFGNLSNLQFLGIEGNPLDKKLLKILAEKSVTGLIFYLRDNRPEIPLEKDRQF
IEINTDGDIQDGYENVEVSNEHLNPELQKKSFTVLSYNTLCQHYATPKMYRYTPSWALSW
DYRREKLKDQILSFKSDVICLQEVESKSYEEFWLPLLQKNGYAGTFYAKTRAKTMQTKDS
KKVDGCCIFYKESEFNVLYKDSVDFSGVWMKHKKFQRTEDYLNRAMNKDNVALYMKLEHI
KSGESVWVVTTHLHWDPQFNDVKTFQVGILLDHLEELLKDNNNASSKQEIRKCPVIICGD
LNSHLDSAVYELLSTGHVQVHKDIENRFYGYMSQKNFAHNLALRSSYDCIGELPFTNFTP
SFTDVIDYIWYSTHALRVRGVLGPVDKDYVSKFIGFPNDKFPSDHIPLLARYEFTKGGGG
SRKI
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgaataatccttcggttttagggtacccttcattatctagccaacctgctggaccacag
aggactgtcactccaaatgccatgggcgctcagttacatacccctccaggtttgatgagc
gctggtggcaacgactactctattcagttgttgcaacaactaaataacagcaacaacaac
aacaataataacaacaacaataacaacaacaacaataacaatacaaacgtacaaagcctg
cctccagatgaaaatattaataacccgttgtttcacccacatttagaggacccttccttg
ttgagtaacccaatttggaaattgcaattacaattaatctctatctcaatgcagactttg
ggccaaccaaacgtatatgcaagacaaaatgcaatgaaaaaatatttggttactcaaaaa
caaccttctcaaaatggcggtaaccacgtagcaaataacaacggtaacggtatgaactct
aataataataatggaaatggtaatcctcaattaaacgaagcatccatgtcgttagtagat
aaaacaaaacaattgttaatggaaatggcttccgacactccaaatagtaatgacctttca
aacgatattaaaaactcctcttctcaacaacagggccaacaaaataatacaaattcaaca
aatagcaccatttctactccaaccactccaaagacagaattaaatcaattatcatctact
ccaacaaccacatctctattactacaacataaaaaactatcccagtataatatagacgag
gatgacgaagtcgaacaacaaaatagaattattactcctgacgaagttaaattcaacgac
caattatggcatgccattgatctgtcgaatctgaaaatatttaatgtcaacaatagaatc
ttcgattacaaattcttaaccagattatacttaaatggtaacaatttaacttctttacca
aaggaaattaaaaaattgaataatatcagggtactagatctttctcataataaattaacg
gaattgccaacagaattagggttttgttatcaattgaaatatttatatctattcgataac
ttaatcaaaactttaccttgggaatttggaaatttatcgaacttacaatttttaggtatt
gaaggtaatccattagataaaaaattattgaaaattttggcagaaaaatcagtaacaggc
ttgattttctacttaagagataatagacccgaaatcccattagaaaaggatagacaattt
atagagattaatacagatggtgatatacaagatggttatgaaaatgtagaagtttcaaac
gaacatttaaatccagaactacaaaagaaatcattcactgtattgtcctataatacttta
tgtcaacattatgcaactccaaaaatgtatcgttacactccttcttgggccttgagttgg
gattatagacgtgaaaaattaaaggatcaaattttgtcatttaagagtgatgtgatttgt
ttacaagaagtcgaatccaaatcatatgaagaattttggttaccactactacagaaaaac
gggtatgctggtactttctatgctaaaacaagagctaagacaatgcaaacaaaggattct
aaaaaagtcgatggttgttgtatattctataaagaatccgaattcaatgtactctataaa
gattcggtagacttcagtggtgtttggatgaagcacaagaagttccaacgtacagaagat
tatttgaatcgtgcaatgaataaagataacgttgctttatatatgaaattggaacacatt
aagagtggagaatcggtttgggtagtaaccacacatttgcattgggatcctcagtttaat
gatgttaaaactttccaagttggtatattattagatcatttagaagaattattaaaggat
aataataatgcaagttctaaacaagaaataaggaaatgtcctgtaatcatttgtggtgat
ttgaactctcatctggattctgcagtttacgaattgttaagtaccggtcatgttcaagtt
cataaagacattgaaaatagattctatggttatatgtctcaaaagaattttgcgcataat
ttagccctacgatcaagttatgattgcatcggtgagctaccattcactaatttcacccca
tcattcactgatgtcatcgattatatttggtattccacccatgctttacgtgtccgtgga
gtactaggtccagtagacaaagattatgtttctaaattcattggtttccctaacgataaa
tttccaagtgatcatatcccattattagcaagatacgagttcactaaaggtgggggtggc
agtagaaaaatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system