KEGG   Vanderwaltozyma polyspora: Kpol_1050p112
Entry
Kpol_1050p112     CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K12600  superkiller protein 3
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kpol_1050p112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpo03019]
    Kpol_1050p112
Messenger RNA biogenesis [BR:vpo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     Kpol_1050p112
SSDB
Motif
Pfam: TPR_22 TPR_19 TPR_2 TPR_1 TPR_11 TPR_17 TPR_16 TPR_14 TPR_12 ANAPC3 TPR_8 TPR_7 Alkyl_sulf_dimr TPR_9 NatA_aux_su
Other DBs
NCBI-GeneID: 5547587
NCBI-ProteinID: XP_001647110
UniProt: A7TF06
AA seq 1027 aa
MSSVKDLLKEAKNELARGDYEEAIEISKEVLKKEENNYFAYVFMGKAYSCIANSVEEALN
SYIRATELVPSNVLGWKGLFLLINSNDVLPTHLTFNKYFDLCGDYSNVLLSQELPLVDLI
HEMRTIRKKYPDCEESFLRHMCPGSQMGESISRHFITPQECLSKLIQIINSKEKEQVSKI
VSRERLKLSANDPLYQTKINSLAWEVYQSSDVEDLYVQLINISDDDEERSKFEEELLDHR
IVVLKSMPIDLKGSYFQKVKSMVEDMVLVGTKSEKAWKLYFEWQDCTDLNSLDGQIVMKY
FTTFPKEPLSVILYAWVCSKYSSYDIKQLNTTGKDEPQAIKDEPDMTEIEQSELSEMTEN
EESIPALLEADILETLMENISRAKTSIIAYRIISQYYLLSAEYAAALPYIKSGISLTAFA
IRDLGAHLINSKFAFTLDLASAYTYFDAPKHHKTALSLFDKVLSEDEFNARAKLGKGLIF
MERENWIEAKTFLSEVAEKFSDNLDILSQLGWSEANLGNHDRALEIFNNVLNSIEGVDIK
TCELKAANYWRQAKTYLLLQKEEELKITDSDMRYVTLAYRSLIHSLKVLDTFSKSYSTLG
DIYANYYSDTKRAFGCYYKAFELDSSDIVAAKYMVETYCNSGNWSAAESISKILVKTDGA
KKYLRYTCWPFRVIGIANLERQQESDAIEWFQSALRIEPNNVESWVGLGQSYLSCGRIEA
SIRVFEKATELDPDHLYAKYFTAQSLSEMGEYVKSISIFEEIIMETPKEESFQVSYSETL
MKHAQDLFNQGFLTKSVSIAIEAISVMSYIATDLNRFPSNLWLSLFSALKLFILVESKVD
KLPIETVVSIFENCKIKDVSEIDDIDGVTISSLLTTADDNVVITCQSLILAAKCAISTGN
IDQATGTLKSSLWHNLGMAELISYLTLKDNKHKESSIFCFKKAIKYQSNSFESWVGLGIA
TMDANWKVSQHCFIKAIALAPRESHIWFNLAVLALKQDDIEFTRQVKSRLQSIAPQDSSA
RLGMALV
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgtcaagtgttaaagatcttttaaaggaggctaaaaatgagcttgctagaggagattat
gaagaagctatagaaatatctaaagaggtgttgaaaaaggaagaaaataattattttgct
tatgtgtttatgggtaaagcttactcctgcatagctaatagtgtcgaagaggctttgaat
agttatataagggctactgaattggtaccgtcaaatgttttgggttggaaaggtctattt
ttattgataaactcaaacgatgttttaccaactcatctcacttttaataaatacttcgat
ttatgtggtgattattccaatgtgttattatcacaggagctgccattggtcgatttgatt
catgaaatgagaacaattaggaaaaaatatcctgattgtgaagaatcattcctaagacat
atgtgccctggttcgcaaatgggcgaatctatctctagacattttatcactccacaagaa
tgtctctcaaaattgatacagataattaattctaaagagaaagaacaagtttcaaaaatt
gtcagcagagaaagattgaaactaagtgctaatgatccattataccaaacaaagattaat
tcattggcttgggaggtttatcaaagttcagatgtcgaagatctatacgtccaattgatt
aatatttctgatgatgatgaagagagatcgaaatttgaagaagagctattagatcataga
atcgtagttttgaagtcaatgccaattgatcttaagggatcatacttccagaaggtaaaa
tcgatggtggaagatatggtcctagttggtactaagtctgaaaaagcgtggaaactttat
tttgaatggcaagattgtactgatctgaattctttggatggacaaatagtaatgaaatat
tttactacgttcccaaaggaaccattgtcagttatactatatgcatgggtatgttcaaaa
tattcttcttacgacataaaacaattaaacacaacaggtaaggatgaacctcaagccatt
aaagatgaaccagatatgacagaaattgaacagtctgaactgtcagaaatgacagaaaat
gaagaatcaataccagcattattggaagctgatattttagaaacccttatggaaaatata
tcaagagcaaaaactagtatcattgcttatagaataatttcccaatattacttattgtct
gcggaatatgctgctgcactaccttatattaaatctggtatatcattaacagcatttgcg
attagagatttaggtgcacatttaattaattcaaaatttgcatttactttagatcttgct
tccgcatacacttatttcgatgctccaaaacatcacaaaacagcgttaagtttattcgat
aaggtcctatccgaagatgaatttaatgctagagctaaactaggtaaaggtctgattttc
atggaaagagaaaactggatagaagctaaaacgttcttatctgaagttgctgaaaaattt
tcagacaatttagatattttatcacagttaggttggagtgaagcaaacctcggaaatcat
gatagagctcttgaaattttcaataatgttctaaatagtatagaaggtgttgatattaag
acatgtgaattaaaagcggccaattattggagacaagccaaaacatatttactattgcaa
aaagaagaagagttaaagataactgatagtgacatgagatacgtaacattagcttataga
tcgctaatccattcattaaaggtactagataccttctcaaaatcttattctactttgggt
gatatttatgcaaattattacagtgatacaaaaagggcattcggctgttactataaggca
tttgaattagattccagtgatatcgttgcagcaaaatatatggtcgagacatattgtaac
agtggaaattggtcggctgcagaatcaatctcaaaaatcttagttaaaaccgatggtgca
aagaaatatttaaggtatacatgttggccatttagagttataggtattgctaatttagag
agacaacaagagagcgatgcaattgaatggttccaatctgctttacgtattgaaccgaat
aatgtcgaatcgtgggttggattaggtcagtcttatttgagttgcggcagaatagaagcc
tctattagagtatttgaaaaggcaacagaattagatcccgatcacctgtatgcaaaatat
tttacagcacaatccctttcagagatgggtgaatatgttaagagtatttctatatttgaa
gaaataataatggaaaccccaaaggaagaatcattccaagtttcatactcagaaactttg
atgaaacatgcccaggatttatttaatcaaggatttttaacaaagtctgtatcaattgct
attgaggcaatttctgttatgagttatattgcgacagatttgaatcgtttcccaagcaat
ctatggctatctcttttctctgcattgaaattatttattctagtcgaatcaaaagtggat
aagttaccaatagaaaccgtagtttcgatttttgaaaattgtaaaataaaagacgtatca
gaaatcgatgatatcgatggtgttaccatctcatcattgctaactaccgctgatgataat
gttgtgataacatgccaatctctgattttagctgctaaatgtgcaatttcaactggtaat
attgatcaagctacaggaactttaaagtcatcactgtggcataatttaggtatggccgag
ctcatttcttatttaacattaaaagataataagcacaaggaatcatcgatcttctgcttt
aagaaagctattaaatatcaatcaaatagttttgaatcctgggtaggtttagggattgcc
actatggatgccaattggaaagtctctcagcattgttttataaaagcgattgctttagca
ccaagagagtctcatatttggtttaacttggctgttcttgcattgaaacaagacgatatt
gaatttacacgtcaagtcaaatcaaggttacagagtatagccccacaagattcctcagca
aggcttggtatggcattagta

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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