KEGG   Vigna radiata (mung bean): 106777690
Entry
106777690         CDS       T04126                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106777690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vra03019]
    106777690
Enzymes [BR:vra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106777690
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     106777690
SSDB
Motif
Pfam: OB_NTP_bind HA2_C dsrm Helicase_C DEAD HA2_N AAA_22 AAA_19 nSTAND3 ATPase AAA_11 Lectin_leg-like PhoH Rad17 T2SSE
Other DBs
NCBI-GeneID: 106777690
NCBI-ProteinID: XP_014520882
UniProt: A0A1S3VRR9
Position
11:complement(18441639..18475939)
AA seq 1106 aa
MSPRIPFLAMDSSLPVHVDDADKGFNCDADKGFNCDADKGNSSSDFPSEDWKQKLNMLLN
DQSKQELVSREKKDRRDFQQIQTLASKMGLYSHMYAKVVVVSKAPLPNYRYDLDDKRRLR
EVNLPTTLLRQVDGYLQEYLTQKSRRKESFSDLWCATPADSGGTHEGLFEPPQSLSCSRA
VVDKFLCQRSSQMRDQQRTWQESPDGSKTLEFRSSLPAYKEKEAILSAISRNQVLIISGE
TGCGKTTQVPQFILESEIELVRGAVCNIICTQPRRIAAISVSERVASERGEKLGETVGYK
VRLEGMQGRDTHLLFCTTGILLRRLLDDKKLKGITHIIVDEIHERGINEDFLLVVLKDLL
AFRPELKLILMSATLDAELFSSYFNNASTMKIPGLTYPVRTHFLEDILEMSGYKLTPDNQ
IDDYGPERIWKMNKQLPGKRKSQLSSAVEDVLKAADFNYYSPQTRESLSCWNPDFIGFNL
IQYILCNICEHERPGAILVFMIGWDDINALKEKLLTHPVLSDPNRVLLVMCHGSMDSLEQ
RLIFQEPEDGVRKIVLATNIAETSITINDIVFVIDCGKAKESSYDALNNTSCLLPTWISK
VSVQQRRGRAGRVQPGECYHLYPRCVYDSFTEHQLPEILRMPLQSLCLQIKSLKLGSISE
FLSRALQSPEILAVQNAIEYLKTIGALDESENLTILGRHLAVLPMEPKLGKMLIFGVIFN
CLDPILTIVAGLTVRCPFLTPSDKKDLAQAAKSQFSHDYSDHLAIVRAYDSWKDAEIDNA
GHEYCWKNFLSPQSMKVIEALRVEFLSLLKDIGLVDRNMSSCNAWSYDMYLIRAAICYGL
YPGICSVVHKDKSFSLKTTDDGKVFLHSNSVNARESRIPYPWLVFNEKIKVNSVFLRDST
AVPDSVVLLFGGRISKGDTDGHLKMSGGYLEFFVKPAVADMYQSIRKDLDRLIHSKLQFP
QMSIHSFHELLFAIRLLICNEKCEGKFVLSCQLLKPPMMALQQALVSRTNSGPGGDNTKG
QLQTLLTRAGYGAPFYTTTQLKNNQFRATVEFNGVQIMGQTYSNKKNAEKDAAAEALQWL
MGRIQTGNEDINDMTMLLKKRKTDHN
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgtcccctcgcattccgtttctcgccatggattcttctcttcccgttcatgttgacgat
gctgacaaagggtttaattgcgatgctgacaaagggtttaattgcgatgctgacaaaggg
aattcttcgagtgatttccccagcgaggactggaagcagaaattaaacatgcttttgaat
gatcagagtaagcaagagttggtctcaagggagaaaaaggatcggcgtgattttcagcaa
atacagactttggcgagcaaaatggggttgtatagccatatgtatgcgaaggtggttgtt
gtcagcaaagcccctcttccaaactacagatatgatttggacgataaacgccgccttagg
gaggtgaacctacctactactttgttaaggcaagttgatggatatcttcaagaataccta
acccagaagtcaagaaggaaggaaagcttttccgatttgtggtgtgcaacaccagccgac
agcggtggtacacatgaagggctttttgagccacctcagtcactatcatgcagcagggct
gtagtggataaatttctttgtcagagaagttcacaaatgcgtgatcagcaaagaacttgg
caggaatctccagatggaagtaagactctggaatttcgtagcagtctacctgcttataaa
gagaaggaagcaatattatcagccatatcaaggaatcaggtacttatcatctcgggtgaa
acaggttgtggaaagacaacacaagttccacaatttatcctagaatcggagatagaatta
gttcgtggagctgtgtgtaatatcatttgcacacaaccaagacgcattgcagcaatttct
gtttctgaaagagttgcctctgaaagaggagagaaattgggtgaaactgttggatataaa
gttagacttgaaggcatgcaagggagagatacccatcttctcttctgcaccacaggcatc
ttattaagaagattactagatgataaaaaattaaaaggcataactcatattattgttgat
gaaattcatgagcggggaattaatgaagattttttgcttgttgtccttaaagatcttcta
gctttcaggccagaactgaaactgattttaatgagtgctacccttgatgctgagctcttc
tcttcatattttaataatgcttcaactatgaagattccgggtttgacatatcctgtcaga
actcattttttggaggatattttggaaatgtcgggctacaaattgactcctgacaatcaa
attgatgactatggtccagaaaggatttggaaaatgaacaaacagttgccaggaaagagg
aaaagccaattatcttctgctgtggaggatgtgttaaaagctgctgatttcaattattac
agtccgcaaacaagagagtctttgtcttgttggaatcctgactttattggttttaacctc
atacaatatatactgtgcaatatatgtgagcatgaaagaccaggtgccattttagttttc
atgattggatgggatgatataaatgctctgaaggagaagctcctaacacatcctgtcttg
agtgatccaaaccgagttttgttggtgatgtgccatggctcaatggacagtttggagcag
aggttaatctttcaagaacctgaagatggagtacggaaaatagtgctagcaacaaatatt
gctgaaacgagtatcacaatcaatgatattgtttttgttatcgactgtgggaaggcaaaa
gaatcatcatatgatgcattgaataacacatcttgtttgcttcctacttggatttctaag
gtttcagttcaacaaagaagaggaagagctggtcgtgttcaaccaggagaatgttatcat
ctctatcctagatgtgtatatgattctttcacagagcatcaattacctgaaattttgagg
atgccgttgcaatctctctgtttgcaaatcaaaagtttgaaactaggaagtatatctgag
tttttgtctagggctttacagtctccagagatacttgcggtgcaaaatgcaattgaatat
ttgaaaacaattggagctctggatgagagtgagaatctgactattttagggcgccacctg
gcagtgcttcctatggaacccaaacttggcaagatgctgatatttggtgtcatattcaat
tgtctggatcctatactaacaattgttgcaggccttactgttcgatgtccttttctaaca
ccttcagataaaaaagatcttgcacaggcagcaaagtctcagttttcccatgattacagt
gaccatcttgccattgtgagggcctatgatagctggaaggatgccgaaatagacaatgct
ggacatgaatactgctggaagaattttctttctccacaatccatgaaagttattgaggct
cttcgagtggaattcttatccctgctcaaagatattggattagttgatagaaacatgagc
agttgcaatgcatggagctatgatatgtatctcattcgagcagctatttgctatggccta
tatcctggaatctgctcggttgtgcataaggataagtcattttctctgaaaacaacggat
gatggcaaagtgttcctacattcgaattcagtgaatgctcgcgaatctagaattccatat
ccatggctagtttttaatgagaagataaaagtgaactctgtatttctccgtgactcaaca
gctgtgcctgattctgtggtacttctttttggtgggagaatctcaaaaggagatactgat
ggtcacttgaaaatgtcgggaggatatttggagttttttgtgaaacctgctgttgctgac
atgtaccagagtataaggaaagatcttgacagactcattcacagtaaattacagttcccg
cagatgagcatacactcattccatgagctcttatttgctatacggttgttgatttgtaat
gagaaatgtgaaggcaaatttgtattgagttgccagctccttaaaccaccaatgatggca
ttgcaacaagcattggtttcaagaacaaacagtggacccgggggtgataatactaaagga
cagcttcaaacattgctgacccgagctggatatggtgcacccttctacacaactacacag
ttgaagaataatcagtttcgtgctacagttgagtttaatggagtgcagattatgggccaa
acatatagcaacaaaaagaatgcagaaaaggatgctgcggctgaggcactgcagtggctt
atgggtagaatacaaaccgggaatgaggatatcaatgacatgacaatgttgctgaagaaa
aggaagacagatcataattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (15)   
   RefSeq(nuc) (11)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (44)   

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