KEGG   Vibrio rotiferianus: BSZ04_19910
Entry
BSZ04_19910       CDS       T05115                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
vro  Vibrio rotiferianus
Pathway
vro00550  Peptidoglycan biosynthesis
vro01100  Metabolic pathways
vro01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vro00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BSZ04_19910
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    BSZ04_19910
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vro01011]
    BSZ04_19910
Enzymes [BR:vro01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BSZ04_19910
Peptidoglycan biosynthesis and degradation proteins [BR:vro01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   BSZ04_19910
SSDB
Motif
Pfam: Transpeptidase PBP_dimer SURF1 DUF6563
Other DBs
NCBI-ProteinID: ASI97158
Position
2:2378163..2380082
AA seq 639 aa
MIRRRRSQIRDYQAEARLFASRAVFAFLGIVVLMGLLVANMYNIQVNQFQDYQTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVYNLELTPEKIKNIDETIQGLQTILEITPEQIER
FQRERKRTRRFKSVPLLTQLNEKQVAVFSVNQYRFPGVEISATLKRYYPYGEVLTHVIGY
VSRINDRDMQRLVREEKDANYQATRDIGKLGIEKYYEDLLHGTAGYQEVEVNSRGRVIRT
LKYIPPIPGRDIVLNLDINLQLYVHQLLDARRGSAVVLDPRDNGVLAMVSSPSYDPNAFV
HGISGKAYRALLNDKNRPLVNRTTLGIYPPASTIKPFMAVAALEEGVVTPKTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVDIIKSIEESVDTFFYQIAYDMGIDRISNWMMMFGFGDYT
GIDIYEESKANMPTRDWKMARHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGA
VTAPHLLKATIDNGGDFEQQKTSEYVTYPPIQNVPDKYWNMAKEGMRLVNHGTKGTARRS
FYKMTYQTAGKSGTAQVFGLGENEEYNADEIAEHLRDHALFTGFAPFDDPKVVVTVVLEN
AGGGSSNGAPVVRKIFDRVVLGDNVAATDDDAAKKKVSH
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgattcgtagacgccgcagtcaaattcgagattaccaagcagaagcacgcctgttcgcc
agtcgtgctgtttttgcatttcttggtattgttgtcttgatgggcctgttagttgctaat
atgtacaacattcaggtcaaccaatttcaagactatcaaacccgttccaacgataaccgc
attaaagtggtacctatcgcacctaaccgcggccttatctacgaccgcaacggagtgcta
cttgctgaaaaccgtcccgtttataacctggagttaaccccagaaaagattaaaaacatt
gacgagacaatccaagggttacaaaccattctggaaattaccccagaacaaatagaacgc
tttcaacgtgagcgtaagcgtacacgtcgcttcaagtctgtaccacttttgacccaatta
aatgaaaagcaagtagccgtattttctgtcaatcaataccgtttccctggtgttgagatc
agtgcgaccttgaaacgttactacccatacggcgaagttttgacccacgtcattggttac
gtatcacgaattaacgaccgcgatatgcaacgtttagttcgtgaagagaaagacgccaac
taccaagcaacccgcgatatcggcaagttaggtatcgaaaaatattacgaagacctactg
cacggtacggcaggctaccaagaggtagaagtcaacagccgtggtcgcgtcatccgtaca
ctaaagtatatccctccgattccaggtagagatatcgtcttgaacctcgatatcaacctt
cagttgtacgtacaccagttgttggatgctcgacgtggtagtgcagtagtgcttgatcct
cgtgataacggcgtacttgcaatggtatcgagcccgagttacgacccaaatgcatttgta
catggtatctcaggcaaagcttaccgagctctactgaacgataagaatcgtcctttggtg
aaccgaactacgctcggcatttatccaccggcctcgaccattaagccattcatggcagtg
gcggctctggaagaaggtgtcgtcacacctaaaacaactcgtaatgacccaggttattgg
cgtattccaaactcagatactcgccctttccgtgactggctgcgctggggacatggtcgc
gttgacatcatcaagtcaattgaagaatctgtagatactttcttctatcaaatcgcctac
gacatgggcattgaccgtatctctaactggatgatgatgtttggctttggtgattacaca
ggcatcgacatttacgaagaaagtaaagctaacatgccaacacgtgattggaagatggct
cgccataagactccttggtacaagggcgatacaattcctgttggtataggccaagggtat
tggacagcaacgccaatgcagatagccaaagcaacatcggttctcgtcaatgaaggcgct
gtaaccgcaccgcacttactcaaagcaaccatcgacaatggtggtgattttgaacagcaa
aaaacatctgagtatgtgacctaccctcctatccaaaacgtgccagataaatactggaat
atggccaaagaaggtatgcgcttggttaaccatggtaccaagggtacagctcgccgctcg
ttctacaagatgacttaccaaacagccggtaagtcaggtactgcacaagtatttggtctt
ggcgaaaatgaagagtacaacgcggacgaaattgcagaacacttacgagaccacgctcta
tttacggggtttgcgccatttgacgatccgaaagtggtggtaactgttgtactagaaaac
gccggcggtggctcaagtaatggtgctccggtggtgagaaagatcttcgacagagtcgtt
ttgggcgacaacgtagctgctacagatgatgacgcagcgaagaaaaaggtatcgcactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system