KEGG   Vibrio mediterranei: BSZ05_10090
Entry
BSZ05_10090       CDS       T04936                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vsh  Vibrio mediterranei
Pathway
vsh00260  Glycine, serine and threonine metabolism
vsh00460  Cyanoamino acid metabolism
vsh00630  Glyoxylate and dicarboxylate metabolism
vsh00670  One carbon pool by folate
vsh00680  Methane metabolism
vsh01100  Metabolic pathways
vsh01110  Biosynthesis of secondary metabolites
vsh01120  Microbial metabolism in diverse environments
vsh01200  Carbon metabolism
vsh01230  Biosynthesis of amino acids
vsh01240  Biosynthesis of cofactors
Module
vsh_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BSZ05_10090 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    BSZ05_10090 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BSZ05_10090 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    BSZ05_10090 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    BSZ05_10090 (glyA)
Enzymes [BR:vsh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     BSZ05_10090 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ASI90106
Position
1:2150748..2151998
AA seq 416 aa
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACELFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWARMREIADKVDAYLFVDMAHVAGLIAAGVYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKEYQARVVKNAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPAITRRGFTEADATELANWMCDVLDNINDESVIEATKAKVLEICKRLPVYA
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcttaagcgtgatatgaacatcgctgattacgatgcggagctatttgcagctattcaa
gaagaaacccttcgtcaagaagagcacatcgagcttatcgcttcggaaaactacaccagc
cctcgcgtaatggaagcgcaaggctctcagctaactaacaaatatgctgaaggttatccg
ggcaagcgctactacggtggttgtgaatacgtcgataaagcggaagcactagcgattgac
cgtgcgtgtgagctatttggttgtgagtatgcgaacgttcagcctcactctggctctcaa
gcgaatagtgccgtgtacatggctctacttaacccgggcgatacagttttaggtatgagc
ttggctcacggtggtcaccttactcacggttctccagttaacttctctggtaagcactac
aacgtaattccttacggtatcgatgaagctggtcaaatcaactatgacgagatggaacag
ctagcacttgagcacaagccaaaaatgatcattggtggtttctctgcgtacagccagatc
gtagactgggctcgtatgcgtgaaattgcggataaagtcgacgcgtatctgtttgttgat
atggcgcacgttgcaggtcttattgcagctggtgtttatccaacgcctgttcctcatgca
cacgttgtgacgaccacaacacacaaaacattagcgggtcctcgcggtggtctaatcctg
tctaatgcaggcgaagacatgtacaagaagctaaactcagctgttttccctggtggtcaa
ggtggtcctttgatgcatgttatcgctggtaaagcagtagcattcaaagaagcaatggag
cctgagtttaaagagtaccaagctcgcgtagttaagaacgcaaaagcgatggttgcccag
ttccaagagcgcggttacaagattgtgtctaacggaactgagaaccacctgttcctagtt
gacctaatcgacaaagatattacaggtaaagaagcggatgcagccctaggtgcagcgaac
attactgtaaacaaaaactcagtacctaatgacccacgcagcccgttcgtaacgtctggt
atccgtgttggttctccagcgattactcgccgtggttttactgaagcagatgcgactgag
cttgctaactggatgtgtgatgttttagacaacatcaatgatgaatcagtgattgaagcg
acaaaagctaaagtactagagatctgtaagcgtctacctgtttacgcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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