KEGG   Vibrio mediterranei: BSZ05_20665
Entry
BSZ05_20665       CDS       T04936                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vsh  Vibrio mediterranei
Pathway
vsh03030  DNA replication
vsh03430  Mismatch repair
vsh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BSZ05_20665
   03430 Mismatch repair
    BSZ05_20665
   03440 Homologous recombination
    BSZ05_20665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vsh03032]
    BSZ05_20665
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_20665
Enzymes [BR:vsh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BSZ05_20665
DNA replication proteins [BR:vsh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BSZ05_20665
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BSZ05_20665
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ASI92222
Position
2:complement(876242..876865)
AA seq 207 aa
MMLSSAKSVVVLDFETTGLSPNQGDRAIEIGAVKLENGTVVDRFQSLMNPGFRVSGFIEN
YTGISNAMLANAPSCKDVMGEFSTFIQNSNLVAHNASFDKRFLDAELELINESYTGEFAC
SLLVSRRLNQEAHSHKLGDLVAYHNIANDGVFHRALADAEVTASLWLLLVDSLTERFQIN
DPSFALMQRLSKQPKASIAQFLTKQAG
NT seq 624 nt   +upstreamnt  +downstreamnt
atgatgctttcatctgccaaatctgtcgtagtactcgactttgagaccactggtctttca
ccaaatcaaggcgacagagctattgaaattggtgcagttaagctagaaaacggcaccgta
gtcgataggtttcaatccctcatgaatccgggatttcgtgtcagtggatttatcgaaaat
tacactggcatcagtaatgccatgctggctaacgcgccaagctgtaaagacgtgatgggt
gagttttcaactttcatacaaaacagtaatctcgttgctcacaatgcttcgttcgataag
cgatttctggatgcagagctagaactaatcaacgaaagttacacgggggaatttgcctgt
tctcttctagtctcaagacgtttaaatcaggaagctcactcccacaaactcggcgactta
gtggcttatcataatattgctaatgatggcgtctttcaccgtgctttagccgatgcagaa
gtgacagcatcactatggttgctcctcgttgattcattgactgaaagattccagatcaat
gatcctagttttgctttaatgcaaagactgtccaaacaaccgaaagcatcgatagctcag
ttcttaacaaaacaagctgggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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