KEGG   Vibrio vulnificus YJ016: VV0239
Entry
VV0239            CDS       T00150                                 
Name
(GenBank) RecG-like helicase
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
vvy  Vibrio vulnificus YJ016
Pathway
vvy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VV0239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvy03400]
    VV0239
Enzymes [BR:vvy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VV0239
DNA repair and recombination proteins [BR:vvy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     VV0239
SSDB
Motif
Pfam: DEAD Helicase_C RecG_wedge ResIII RecG_dom3_C tRNA_anti-codon AAA_30 SecA_DEAD SNF2-rel_dom IMS_HHH HHH_5 SLFN-g3_helicase Cdd1 PhoH BrxC_BrxD IstB_IS21 nSTAND3 DUF1525 PRTase_2 Zeta_toxin Zot
Other DBs
NCBI-ProteinID: BAC93003
UniProt: Q7MPX2
Position
I:complement(247209..249290)
AA seq 693 aa
MSAQLLSAVPLTSLSGVGAKVAEKLEKIGLSSVQDLLFHLPLRYEDRTRIYPIAKLHAGL
WAAVQGHVMQVDTLFGKRKMLTVKLSDGNGTITLRFFNFTAAMKNNFAEGKLVHAYGEIK
RGNMGLEIVHPDYKFFAPTQKPDVEQSLTPVYPTTDGLRQITLRNLTDQALALLDKAAVQ
ELLPAGLYDQQLTMGQALHIIHRPSPEIDLELFDEGKHPAQVRLIMEELLAQNLSMLAVR
SKGQQDVALPLPPVHQLKQQLLAQLPFSPTNAQARVVQEIEEDMQKAHPMMRLVQGDVGS
GKTLVAALAAVRAIEHGYQVALMAPTELLAEQHAINFANWFEKMGIPVGWLAGKLKGKAK
EAELARIASGEAKMVVGTHALFQEHVVFDHLALVIIDEQHRFGVHQRLELREKGAKQGAY
PHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKREDIVERIRHACL
NEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDVRIGLVHGRMKPAEKQAVMQAFK
NNELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHA
PLSKTAQKRLSVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQRLIPE
VQRAARYIHHNYPQNAAAIIERWLGERDIYSKA
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgtctgcccaactgttatctgctgtccccctcacatccctcagtggggtcggtgctaag
gtggctgaaaagctggagaaaattggcctaagcagcgtgcaagacctgctgtttcacttg
ccacttcgttacgaagaccgcacccgcatctacccgattgccaaattgcatgccggactg
tgggccgctgtgcagggccatgtgatgcaagtggataccttgtttggtaaacgcaagatg
ttgacggtgaagctcagcgacgggaatggaaccatcacgttgcgttttttcaactttacc
gcggcaatgaaaaacaattttgctgaaggtaagttagtacacgcttacggcgaaattaag
cgcggtaatatggggctggagatcgttcacccagactacaagtttttcgccccaacgcag
aagcccgatgtggagcagagcttaacgcctgtttatcctaccactgatggcttaaggcaa
atcacactgcgtaacctcacagaccaagccctcgccctgctcgataaagccgcggttcaa
gagttactgcctgccgggttgtatgaccaacaactgaccatggggcaagcgctgcacatt
atccatcgtccttcaccggagattgatctggaactgttcgacgaagggaagcaccctgcc
caagttcgcttaattatggaagagttgctggctcagaacttatccatgctcgccgtgcgc
agcaaaggtcagcaagatgtcgcgttgccacttccccctgtccaccagcttaaacaacag
ctgttagcccaactgcctttttcaccgaccaatgcccaagcgcgagtggtacaagaaatt
gaagaagacatgcaaaaagcgcatccgatgatgcgtttggtgcaaggggatgtcggttct
ggcaaaaccttagtggcagccttggccgcggtacgcgctatcgaacatggctaccaagtg
gcgctgatggcgcccaccgaactgttggccgagcagcacgcgatcaacttcgccaattgg
tttgaaaaaatgggcattcccgttggctggctcgctggcaagctcaaaggtaaagccaaa
gaagccgaattagcccgcattgccagtggcgaagcgaaaatggtggtcgggacacatgcg
ctgttccaagagcacgtggtgtttgaccatcttgctcttgtgatcattgatgaacagcac
cgctttggcgtgcatcaacgcttggaactgcgcgaaaaaggcgccaaacaaggcgcttac
ccacatcaactgatcatgactgctactccgatccctcgcacattggccatgaccgcctat
gccgatttggaaacatcggtgatcgacgagttaccgccgggacgaacccctatccaaacc
gtcgcgattcccgacaccaaacgcgaggacattgtcgagcgcattcgtcatgcctgcctc
aatgagggtaagcaggcgtattgggtctgtaccctgattgatgaatcggaagtattggaa
gcccaagcggcagcagacactgccgaagagctgcaacgtaaattgcctgatgttcgcatt
ggtttggtgcatgggagaatgaaaccggctgaaaaacaagcggtgatgcaagcattcaaa
aacaatgaattgcatcttttggtggccaccacagtgatcgaagtcggtgtcgatgtgccc
aacgccagcttgatgatcatcgaaaaccccgagcgcttgggtctcgcacaattgcaccag
ttgcgcggtcgcgtgggtcggggctcagtagcaagccactgcgtattgctctatcacgct
ccgctgtccaaaacagcgcaaaagcgcctctcggtgctgcgcgaaagtaacgatggtttc
gtcattgctcagcgcgatcttgagatccgcgggccaggtgagctgctcggcaccaaacaa
actggcctagcggatttcaaaattgccgatctcgtccgcgaccagcgccttatccccgaa
gttcagcgcgctgcacgctacattcaccacaattacccacaaaatgccgccgcgattatt
gaacgctggttgggcgagcgtgatatttattctaaggcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (31)   

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