KEGG   Vibrio vulnificus YJ016: VVA0508
Entry
VVA0508           CDS       T00150                                 
Name
(GenBank) choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
vvy  Vibrio vulnificus YJ016
Pathway
vvy00260  Glycine, serine and threonine metabolism
vvy01100  Metabolic pathways
Module
vvy_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VVA0508
Enzymes [BR:vvy01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     VVA0508
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 NAD_binding_8 DAO Lycopene_cycl Thi4 Pyr_redox_2 FAD_binding_3 Pyr_redox_3 ApbA
Other DBs
NCBI-ProteinID: BAC96534
UniProt: Q7MF12
Position
II:576182..577864
AA seq 560 aa
MQQHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKY
AWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQAC
LPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNGYQ
QEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEKRAVGVEFELAG
ELRTCFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVGQNLQDHLEVY
FQYHCQKPITLNGKLDWFSKGLIGTEWILTRKGLGATNHFESCAFIRSRAGLKWPNIQYH
FLPAAMRYDGQAAFDGHGFQVHVGPNKPESRGRVEIVSANPLDKPKIQFNYLSTERDRQD
WRDCIRLTREILAQPAMDEFRGEEIQPGINVATDAEIDQWVKENVESAYHPSCSCKMGAD
DDPMAVLDEECRVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHKQPLPPQR
SKVWLAPSWETQQRTGEPMR
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgcagcaacactacgattacattatcgtcggtgcgggttccgctggctgtgtgctagcg
gatcgactatcagagagtggtgatcacagtgttttattactcgaagcgggcggttccgac
aagagtattttcattcaaatgccaacggcgctctcttaccctatgaactcagagaagtac
gcttggcaatttgaaaccgatgcagaagcggacttagatggccgccgtttacattgccca
agagggaaagtgctcgggggcagttcctccatcaacggcatggtttatgttcgtggtcac
gcctgtgattttgatgaatgggaagagcagggtgcaaaaggttggaattaccaagcgtgt
ctaccgtattttcgccgagcagaaaactggattgacggggaagatgagtatcgcggtggc
gatgggccattaagtacctgtgctggcaataagatgacgctgaatccactctatcgcgcg
ttcattgacgcaggtaaggaggccggatatccagaaacatcggactacaatggctaccaa
caagaaggctttggtccgatgcatatgacggttaaaaatggtgtgcgagcttcaacctca
aacgcatacttaagccgtgccaaaaaaagaagcaatttcaaactgatcaaaggcgttgtg
gttcaacgtatcttactggaagaaaagcgtgccgtaggggtcgagtttgaactggcaggc
gaactgcgtacttgttttgccaaaaatgaagtgatttccagtgcgggttcgattggttcg
gtgcaactgttacagctctctggcattggccctaaaacggtacttgagaaggcgggggtg
acgcccgtttaccatctgccaggcgttggacaaaacttgcaagaccatctcgaagtctat
ttccaataccattgccaaaagcccatcaccttgaatgggaaattggactggttcagcaaa
gggttgattggaaccgagtggattttaacgcgcaaagggcttggggcgaccaatcacttt
gagtcttgcgcctttattcgctcacgtgcaggtttgaaatggccgaatattcagtaccac
tttttgcccgcggcaatgcgttacgatggacaagccgcctttgatggtcatggcttccaa
gtccatgttgggccaaacaagcctgagagccgaggccgtgttgagatcgtctcagccaat
ccattggacaaacccaaaattcagtttaactacttatcgaccgagcgcgatcgtcaagat
tggcgagattgtatccgccttactcgcgaaattttggcgcagccagcaatggatgagttc
cgtggtgaagagatacagcccggcatcaatgtcgcgaccgatgcggaaatcgatcagtgg
gtgaaagagaacgttgagagcgcgtatcacccttcgtgctcatgcaaaatgggcgcagat
gatgacccaatggcggtgctcgatgaagagtgtcgtgtacgaggaatcaccaacctgcgc
gtagtggattcatccgtttttcccactattcctaacggcaatcttaatgcgcctaccatc
atggtggcggaaagagccgctgatttaattttgcataaacagccgttgcctccgcagcgc
tcgaaggtttggctagccccgagttgggaaactcagcagcggactggagagccgatgaga
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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