KEGG   Vibrio vulnificus YJ016: VVA0656
Entry
VVA0656           CDS       T00150                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
vvy  Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:vvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvy03016]
    VVA0656
Enzymes [BR:vvy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     VVA0656
Transfer RNA biogenesis [BR:vvy03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    VVA0656
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 DUF2274
Other DBs
NCBI-ProteinID: BAC96682
UniProt: Q7MEL4
Position
II:complement(738229..740265)
AA seq 678 aa
MIIVCPISNISLVKMFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSKTSFFI
PPAYMKKCMHGDKVIAIIRTENEREVAEPQELVEQMLNRFIGRVKMFKGKLNVVPDHPQL
KKMSLKAKTKKGLNPQEFAEGDWVVGHLIRHPLKDDNGFFVEISEKITDADDKIAPWWVT
LAENDLPNSEPAGIDDWQIKDDADLERIDMTHIPFVTIDGESTKDMDDALYAKKNDAGDF
ELTIAIADPTAYITPDDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIEGEIRPAL
CCTVTVSKDGVIGDDIQFFAANIKSHARLAYDNVSDWLETGSCEKWQPSEEIAAIVRDLY
EFSQARAEWREKNAVVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAG
KTLQAHFGTGVFNCHAGFKPEKIADVVELVNPEGTLEFTAESIATREGFAALRRWLSKQE
TTYLDNRIRKFQTYSEVSNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKALILNKEP
VQKPDDSVGEELALHRKHHKIAERNVADWLYARTLADAPENQTLFTGEIFDINRAGMRIR
LLENGAAAFIPGSLIIDNKERIECNGDLGTVSIDKEVVYKLGDVLEVVLADVNQENRSLV
AKPTQVFAELPVVEETQN
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgattatagtgtgcccaatttcaaacataagtttagtaaagatgtttcaagataaccca
cttttagcccagctcaagcaacaaattcaggaaaatctgccaaagaaagaaggcacgatt
aaagcaaccgaaaaaggttttggctttctcgaagtcgatagcaagacaagtttctttatt
ccaccagcctacatgaagaaatgtatgcacggtgataaggtgatcgccattatccgcacc
gaaaacgaacgcgaagttgccgagccacaagagcttgttgagcagatgctaaatcgcttc
atcggtcgtgtgaaaatgttcaaaggcaaattgaatgttgttcctgatcatccgcaactg
aagaagatgtctctcaaagccaaaacgaagaaaggtcttaaccctcaagaatttgctgaa
ggcgactgggttgtcggccatttgatccgtcacccactaaaagatgacaacggtttcttc
gtggaaatcagcgaaaaaattaccgatgccgatgacaagatcgcaccttggtgggtgacg
ctggcggaaaacgacctgcctaactctgagcctgccggtatcgacgattggcaaattaaa
gacgatgcggaccttgaacgtatcgacatgacacatatcccttttgtgaccatcgatggt
gagtcaacaaaagacatggacgatgcgctttacgcgaagaaaaacgacgctggcgatttt
gaattgacgattgccattgccgatccaaccgcttacatcacaccagatgatgaaatggac
aaggttgcacgtgagcgtggctttaccatttatctgccaggacgcaatatcccgatgttg
cctcgtgaccttgctgatgaactgtgttcgctaatcgaaggtgaaatccgccctgccctt
tgctgcacagtgaccgtcagtaaagacggcgtgattggcgatgatatccagttctttgcg
gcaaacatcaagtcgcacgcccgtttggcgtatgacaatgtctccgactggcttgaaaca
ggcagctgtgaaaaatggcagccaagcgaagaaattgctgccatcgtgcgtgacctgtat
gaattctcgcaagctcgcgctgaatggcgagagaagaatgcggtagtcttcccagatcgt
cctgattaccgttttgagctgagtgaagataacgatgtcgttgcgattcacgcagacatg
cgccgcagcgcaaaccgcttggttgaagagtcgatgatcacagccaacatttgcgcgggt
aaaacgctgcaagcccatttcggcaccggcgtatttaactgccatgcaggcttcaaacca
gagaagattgccgatgttgtggagctggttaacccagaaggtacgttggagttcacggct
gagtcgattgccactcgtgaaggttttgctgcactacgccgctggttaagcaaacaagaa
acgacttatcttgataaccgcattcgcaaattccaaacctacagtgaagtgagcaaccag
cctttgccacactatgcgatgggccttgatatctacgcaacttggacgtctccaattcgt
aaatatggcgatatgatcaaccatcgtatgcttaaggctttaattctaaacaaagagcct
gtgcaaaaaccggatgatagtgtcggcgaagagcttgctctacaccgcaagcatcacaag
attgcagaacgtaatgttgcagactggctgtatgctcgcactctagcagacgctccagaa
aatcaaacgctgtttaccggtgaaatcttcgatattaaccgtgctggtatgcgcatccgt
ttacttgaaaatggcgctgcggcattcatccctggttctcttattattgataataaagaa
agaattgagtgcaatggtgacctaggtactgtttctatcgataaagaagtggtatacaaa
ctgggagacgttcttgaagtcgtgttagctgacgttaaccaggagaacagaagcctggtt
gcgaaacctacccaagtattcgctgaattacccgtggtagaagaaactcagaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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