KEGG   Weissella ceti WS105: WS105_0500
Entry
WS105_0500        CDS       T03295                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
wci  Weissella ceti WS105
Pathway
wci03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:wci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    WS105_0500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wci03400]
    WS105_0500
Enzymes [BR:wci01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     WS105_0500
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     WS105_0500
DNA repair and recombination proteins [BR:wci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     WS105_0500
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Auto_anti-p27
Other DBs
NCBI-ProteinID: AIM64090
UniProt: A0A075TYR2
Position
576337..577173
AA seq 278 aa
MPELPEVETVRRGLNRLVKGQTIESVEVRWDKTISNMTPEEFDAEIAGRTIEVVERRGKY
LLFRLSGKKTLVSHLRMEGAYYTMPAGTEPGKHDLVTFKLTDDIDLFYRDTRKFGRMALV
NDTDVMSVAGLAKIGPEPTEEALDLEYMVTIFGKSRTAIKPFLLDQSKIAGIGNIYADEV
LWQTMIHPLTKTNDVTPTELAELRLNIINEMARSIAHHGTTVHSFTDAFGEAGEFQNELD
VYGRHGEPCLRCGTELVKIKVAQRGTTFCPKCQIQKEP
NT seq 837 nt   +upstreamnt  +downstreamnt
atgccggaacttccagaagtggaaacggtccgtcgcggactaaaccgcctagttaaaggt
caaacaattgaatcagtcgaggttcgatgggataagaccatctcgaatatgacaccagaa
gaatttgatgcagaaatcgcaggacgtacgattgaagtggtagagcgtcgtggaaagtac
ttgttattcagattatctggtaagaaaacattggtttctcatctaagaatggaaggtgcg
tactatacgatgcctgcaggaactgaacctggtaagcatgatttagttactttcaagtta
acagatgatattgatttattctatcgagatactcgtaaatttggtcgtatggctttagtg
aatgatacagatgtgatgtctgtagcaggattagctaagattggtcctgagccaaccgaa
gaggcgttagatttagaatacatggtaaccatttttggtaaatcaagaaccgccattaag
ccatttttattagatcaaagtaaaattgcgggtattggtaacatctatgccgatgaagtt
ttatggcaaacgatgatacatccgctgactaaaactaatgacgttacaccaacggaacta
gccgaacttcgtcttaatattattaacgaaatggctcgttcaattgctcaccatggaaca
accgttcacagctttacagacgccttcggagaagctggtgaattccaaaatgaactggat
gtttatggacgtcacggtgaaccttgtttacgctgtggtaccgaattagtcaaaattaaa
gtcgcgcaacgtggaacaacattctgtcccaagtgtcaaattcaaaaggagccataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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