KEGG   Wallemia mellicola: WALSEDRAFT_64979
Entry
WALSEDRAFT_64979  CDS       T03142                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
wse  Wallemia mellicola
Pathway
wse03013  Nucleocytoplasmic transport
wse03015  mRNA surveillance pathway
wse03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    WALSEDRAFT_64979
  09122 Translation
   03013 Nucleocytoplasmic transport
    WALSEDRAFT_64979
   03015 mRNA surveillance pathway
    WALSEDRAFT_64979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wse03019]
    WALSEDRAFT_64979
   03041 Spliceosome [BR:wse03041]
    WALSEDRAFT_64979
Messenger RNA biogenesis [BR:wse03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     WALSEDRAFT_64979
Spliceosome [BR:wse03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    WALSEDRAFT_64979
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 18474976
NCBI-ProteinID: XP_006959079
JGI: Walse1_64979
UniProt: I4YA24
Position
Unknown
AA seq 175 aa
MSDVIQPLDGPSTYKDTRSRIDPEKQREMLERSTTLYCGNLSFYTTEEQIYELFARVASG
QGIKRIIMGLDRNTKHPCGFAFVEYYSHQEAVEALRYINGTKLDERVIRCDLDAQGYKDG
RQFGRGRSGGQVRDEYRQEYDSGRGGWGHLKGQVPSGDNGDQSYSNNSKKRNAED
NT seq 528 nt   +upstreamnt  +downstreamnt
atgagcgacgttattcaaccactcgatggtccatcaacttataaagatacgagatctagg
attgatccagagaagcagagggagatgttagaaaggagtacgacactctattgcggtaat
ctctcattctacacaacagaagagcagatttatgaattattcgcgagagttgcatctgga
caaggcatcaaaaggattattatgggattagacaggaatactaaacatccctgtggattc
gccttcgtcgagtattatagtcaccaggaagcagttgaagccttaagatacatcaacggt
acaaagctcgacgagagagtcatacgctgcgacttagacgcacaaggttacaaagacggc
agacaattcggtagaggaaggtctggtggacaagtccgtgatgagtatagacaagaatac
gatagtggtcgaggtggctggggacacctcaagggacaagtaccatctggggataacggt
gatcaatcttattctaacaattctaagaaaagaaacgcagaagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system