KEGG   Xanthomonas axonopodis Xac29-1: XAC29_13945
Entry
XAC29_13945       CDS       T02500                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
xao  Xanthomonas axonopodis Xac29-1
Brite
KEGG Orthology (KO) [BR:xao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xao03009]
    XAC29_13945 (rimO)
Enzymes [BR:xao01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     XAC29_13945 (rimO)
Ribosome biogenesis [BR:xao03009]
 Prokaryotic type
  ribosomal protein modification factors
   XAC29_13945 (rimO)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 CLP1_P TRAM PrmA
Other DBs
NCBI-ProteinID: AGH78225
UniProt: M4UCS1
Position
complement(3213722..3215095)
AA seq 457 aa
MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRLYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVIGLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRST
FIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVDGASANALPDQVPEEVKQERLARF
MAKQAQISALRLESKIGSVQQCLVDVIEDDIAVARSRADAPEIDGLVHIQNGGELGLKVG
DLVDVEITDSDEHDLFGDALPSGHAVQPGRTLNLQIV
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtcccagctgaaccctaaagtcggcttcgtcagccttggctgcccgaaggcgctcgtc
gattccgaacgcatcctcacccagctgcgcgtagagggctacgacatcgtgcccagctac
gacgctgccgatgtggtggtggtcaacacctgcggcttcatcgattcggcagtgaccgaa
tcgctggacgcgatcggcgaggcgatgaacgccaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcccggagcagattcgcgaggcgtacccgcaagtgctggcggtatccggc
ccgcaggactaccagagcgtcatggaggcagtgcatgccgcgttgccgccgcgtcacgac
ccgttcgtggatctggtgccggactacggcatcaagctgacgccgcgccattacgcgtat
ctcaagatttccgaaggctgcaatcaccggtgcagcttctgcatcattccctcgatgcgc
ggcgatctggtctcgcgtccggtcgatgaagtgctgcgcgaagccgagcggctggtgcgc
ggtggcgtcaaggaattgctggtggtgtcgcaggacacctcggcctacggtgtggacctg
aaatatgccgagcgtccgtggcgggaccgcctgtaccagacccgcatgaaggcgctgtgc
gaggggttgtcggagcttggcgtgtggacgcgcctgcattacgtgtacccgtatccgcac
gtggacgatgtgattgggctgatggccgaaggcaagctgctgccgtatctggacattccg
ttccagcacgccagcccgcgcattctcaagttgatgaagcgccccggcgcggtggaaaaa
accctggagcgcgtgcagcgctggaaggcgatgtgcccggagatcaccgtgcgctcgacc
ttcatcgtcggcttccccggcgagaccgatgccgaattcgaatccttgctggacttcttg
gatcaggcgcagctggaccgcgtcggtgcgtttgcgtattcgccggtcgatggcgccagc
gccaacgcgctgccggatcaggtgcccgaagaagtgaaacaggagcgcctggcgcgcttc
atggccaagcaggcgcagatctctgcgttgcgtctggaatccaagatcggcagcgtgcag
cagtgcctggtggatgtgatcgaagacgacatcgcggtggcccgctcgcgtgccgatgcg
cctgaaatcgatgggctggtgcacatccagaacggtggcgagctcggcttgaaggtgggc
gatctggtggatgttgaaatcaccgacagcgacgagcacgatctgtttggcgatgcactg
ccgtctggccatgcggtgcagccagggcggacattgaacctgcagatcgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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