KEGG   Xanthomonas axonopodis Xac29-1: XAC29_21825
Entry
XAC29_21825       CDS       T02500                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
xao  Xanthomonas axonopodis Xac29-1
Pathway
xao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    XAC29_21825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xao03400]
    XAC29_21825
Enzymes [BR:xao01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     XAC29_21825
DNA repair and recombination proteins [BR:xao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     XAC29_21825
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AGH79746
UniProt: M4U2A2
Position
complement(5104068..5107799)
AA seq 1243 aa
MSISPVTDPYLQLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAA
TQELRRRIRERLVLAASLVPDAPPPFVGAALAAGDLADDPSRPGPLLHATPDVLLTGAIL
ATHLAGASETPAALRRRLQQAVEEIDLAAVFTIHGFCARVLREHALESGQAFAAPELLAN
DRELLGEVAADLWRQRAADAVMAEDLIALWSGGPEALASDLRALVRHPQLLPRPSTPAPD
PTPIRQAAAQALVATLRAHGDTAYDAIASAFDNKVFDGRRARRASFDKAFEELWNGTADA
HWILDEKAHLDKLLPARMREFCRDGAHDRVPCSPLFDALQVWRQADIQVQQWQQNRRIAL
LHALRDDAIARLALLKRQRRVQTYDDLVDGVAHALQGAQADALLKRLRTQYAIALVDEFQ
DTDDRQWSIFSNVFGEGPLAQAAGLEPALFLIGDPKQAIYGFRGGDVRTYLAAAVTAERA
PPLSHNFRSRPGVLAAIDALYAQAGYADAFLTDGIAFHPVRAGTKRVDEDLQRDGVTAPA
LTLWRAPEPPPPAKGKPKPWSAGRARELATAACVAAIRGWLAGGRDGTATVCGRPVQAGD
IAVLVRSHGEATRIQQALGAVGIPAVAAGKQSLFATEEALELLALLQALLDPGDDSRLRA
ALATVLIGEDAIAIAALERDGERHRRWQQQALDWRERWQRGGPLALIGDLGATHGQRLLA
LVDGERRLTNYLQLAELLQEADARALGPHGLVDWLSRRIANADDNDDAQQLRLESDARRV
QIVTLHKSKGLEYPLVFLPYVGIGRKPPDQKPGKRVIVYRDGKRCLHWPDDVDSMEWKAI
KEEWKKEQDAEDARLLYVGLTRAEHALWIASGPFHQHERTALSAMLRALDALQGTAGEGG
VVVDTTTPPAHLPRLPAPSEAQVPLARNPQRHIAPEWWVYSFTQLANADAGAATDPMASA
TVVGSGGSDEPSGSEAVAVAVATDAEPFDPRFAGNRFGVVMHDVFERCDFAAWQAWRPGQ
TAPDGQAAPILEALQRGGYAQDDLDDGLRMLTALIGHTLTVALPEGTRLADVPEPQRRNE
MEFHFAMRPTRVDALLALLHRFGVVGDRQAFGARQRLEGLMTGLIDLTYSVDGRWYVLDY
KSNRLPSYDADALARAMAHSEYELQALIYTVALHRWLRFRLGDAYDYARDFGGVRYLFCR
GLDAARPAVEGMPAPGIHAWRFAPALVQSLDALFAGAPPEALA
NT seq 3732 nt   +upstreamnt  +downstreamnt
atgagcatcagccccgtcaccgacccgtatctgcagttgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagacctttacgctagcgacgctgttcacgcggctg
gtggtcgagcgcggcttgcgcatcggccagatcctggcggtgaccttcaccgaagccgcc
acgcaggagctgcgccgccgcatccgcgaacgcctggtgctggccgcaagcctggtcccc
gatgcgccaccgcctttcgtaggagcggccctggccgcgggcgaccttgccgacgacccg
tcgcggccaggtccgctcctacacgcaacacccgacgtgctgctcaccggcgccatcctc
gccacgcatctggccggcgccagcgaaacgcccgccgccttgcgtcgccgcctgcagcag
gcggtggaagaaatcgatctggctgcggtgttcaccatccacggtttttgcgcgcgcgtg
ctgcgcgaacacgcgctggaaagcggccaggcgttcgctgcgccggaattgctcgccaac
gatcgcgaattgctcggcgaagtcgcggccgatctgtggcggcagcgcgccgccgatgcg
gtgatggccgaagatctcatcgccctgtggtcgggcggccccgaggccttggccagcgat
ctgcgcgcgctggtgcggcacccgcagttgctaccaaggccttcaacgccagcacctgat
ccaacaccaatccgccaagctgccgcgcaagccttggtcgctaccctgcgcgcgcacggc
gacacggcttacgacgccatcgcctccgcattcgacaacaaggtcttcgatggtcgccgt
gcgcgccgtgcaagttttgacaaggcttttgaagagttgtggaacggtactgccgatgct
cactggatactggacgagaaggcacatctagacaaattgctgcctgcacgcatgcgcgaa
ttttgcagggatggggcgcacgatcgcgtaccgtgctcacccttgttcgatgcgttacaa
gtgtggcgacaagctgacatacaggtacaacaatggcagcaaaaccgccgtatcgcgttg
ctgcatgcgctacgcgacgatgccatcgcacggctggcgctgctcaagcggcaacgccgc
gtgcagacctacgacgacctcgtcgatggtgtcgcgcacgcattgcagggcgcacaggcc
gacgccctgctcaaacgcctgcgcacgcaatacgccatcgcgctggtggacgaattccag
gacaccgacgaccgccagtggtcgatcttttccaacgtgttcggcgaaggcccgctcgca
caagccgccggactggaaccggcgctgtttctgatcggcgaccccaagcaggccatctac
ggcttccgtggcggcgatgtgcgcacctatctggccgcggcagtcaccgccgaacgggcg
ccgccgctgagccacaacttccgctcgcgccccggcgtgctggcggccatcgacgcgctg
tacgcgcaggccggctacgccgatgccttcctcaccgacggcatcgccttccacccggtg
cgggctgggaccaagcgcgtcgatgaagacctgcaacgcgatggcgtcactgcgccggca
ctgacgctgtggcgggcgccggaaccgccgccgcctgcgaaaggcaagcccaagccctgg
agcgccggccgcgcgcgcgagctggcgaccgccgcgtgcgttgcagcgatccgcggctgg
ttggccggtggccgcgacggcacggccacggtgtgcggtcgcccggtgcaggccggcgat
atcgccgtgctggtgcgcagccacggcgaggccacgcgcatccagcaggcgctcggcgcg
gtgggcatcccggcggtggccgccggcaagcaaagcctgttcgccacggaagaggcgctg
gaattgcttgccttgctgcaggccttgctcgacccgggcgacgacagccgcctgcgcgcc
gccttggccacggtcttgatcggcgaagacgccatcgccatcgccgcacttgaacgcgac
ggcgagcgtcaccgccgctggcagcaacaggcgctggactggcgcgaacgctggcagcgc
ggcggcccgctcgccctgatcggcgacctcggcgccacccacgggcaacgcctgctcgca
ttggtcgatggcgaacgccgcctcaccaactatctgcaactggccgaactgctgcaggaa
gccgatgcgcgcgcactcggcccgcatggcctggtcgactggctgtcgcggcgcatcgcc
aatgccgacgacaacgacgacgcccagcagctgcggctggaatcggatgcgcgccgcgtg
cagatcgtcaccctgcacaagagcaagggcctggaatatccgctggtgttcctgccgtat
gtcggcatcggccgcaagccaccggaccagaagcctggcaagcgtgtgattgtttatcgg
gatggcaaacgctgtttgcattggcctgatgacgttgactccatggaatggaaagcgatc
aaagaggaatggaagaaggagcaggatgccgaagacgcgcgcctgctctatgtcggcctc
acccgcgccgagcacgcgttgtggatcgccagcggcccgttccaccagcacgaacgcacc
gcattgtcggccatgctgcgtgcgctcgatgcgctgcagggcacggcgggcgagggcggc
gtggtggtggacaccaccacgccgccggcccacctgccgcggctgccggctccgagcgag
gcgcaggtgccgctcgcgcgtaatccgcagcgtcacatcgcacccgagtggtgggtgtat
agctttacccaactggccaacgccgatgccggcgcggccaccgacccgatggccagcgcc
accgtcgtcggcagcggcggcagcgatgaaccgtccggcagcgaggcggttgccgtggcc
gttgccaccgacgccgagccgttcgatccgcgctttgccggcaaccgcttcggcgtggtg
atgcacgacgtgttcgaacgttgcgacttcgccgcctggcaggcctggcggccgggccaa
accgcgcccgacggccaggccgcacccatcctggaggccctgcaacgcggcggttacgcc
caggacgacctcgacgacggcctgcgcatgctcaccgcgctgatcggccacacgctcacc
gtcgcattgcccgaaggcacccgcctggccgacgtgcccgaaccgcagcgccgcaacgag
atggaattccatttcgccatgcggcccacccgcgtcgatgcgttgctcgccttgctgcat
cggtttggcgtggtcggcgaccgccaggccttcggcgcgcgccagcgcctggaaggcctg
atgaccggcctgatcgacctcacctacagcgtggacgggcgctggtatgtgctggactac
aaatccaaccgcctgcccagctacgacgccgacgccctggcgcgggccatggcgcacagc
gagtacgaactgcaggcgctgatctacaccgtggccctgcaccgctggctgcgcttccgc
ctgggcgacgcctacgactacgcccgtgacttcggcggcgtgcgctatctgttctgtcgc
ggcctggatgcggcacgccccgcggtcgagggcatgccggcgcccggcatccacgcctgg
cgcttcgcaccggcgctggtgcagtcactggatgcgctcttcgccggcgcgccgcccgag
gcactcgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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