KEGG   Xanthobacter autotrophicus: Xaut_4284
Entry
Xaut_4284         CDS       T00581                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
xau  Xanthobacter autotrophicus
Pathway
xau03030  DNA replication
xau03430  Mismatch repair
xau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Xaut_4284
   03430 Mismatch repair
    Xaut_4284
   03440 Homologous recombination
    Xaut_4284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xau03032]
    Xaut_4284
   03400 DNA repair and recombination proteins [BR:xau03400]
    Xaut_4284
Enzymes [BR:xau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Xaut_4284
DNA replication proteins [BR:xau03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Xaut_4284
DNA repair and recombination proteins [BR:xau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Xaut_4284
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon T2SSK DUF655
Other DBs
NCBI-ProteinID: ABS69505
UniProt: A7INB1
Position
4749247..4752699
AA seq 1150 aa
MPDPGFIHLHVHSSYSLLEGALSIGKLADLVKADAQPAIALTDTGNLFGALEFSEKMSGA
GIQPIAGVSLALDLPEPAGPRGAIRPKRPRIVLLAQSEPGWRNLMRLVSRSFLETASEDE
PRILPDWLADAHDGLIALTGGPAGPIDKALVSGHPELAAERLDLLASLFGDRLYVEVQRH
DTDAERLAEAGLLELAYAKGLPLVASNEPFFASKTDYEAHDGLLCIAEGRLLSEGDRRRL
TPEHRFKTRAEMLALFADLPEATANTVEIARRCAYRVRTVKPILPRFTSGGGDGDPLAEE
AAELERQAKEGLAQRLEKHGPAPGLDIATYEERLAYELSVITKMKFPGYFLIVSDFIKWA
KAHDIPVGPGRGSGAGSLVAYSLQITDLDPIRFGLLFERFLNPDRVSMPDFDVDFCQERR
DEVIHYVQERYGRAQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPANPV
TLKQAIEDEPRLQASRDQEEVVKRAFDIAVRLEGLNRHASTHAAGIVIGDRKLHELVPLY
RDPKSDMPVTQYNMKWVEQAGLVKFDFLGLKTLTTIDKAVKLIHQRGIDLDISKIPLDDP
KTYAMLGKGETVGVFQVESAGMRRALVDMKADRVEDLIALVALYRPGPMANIPVYCDCKH
GRAKPDYLHPMLEPYLKETFGVIIYQEQVMQIAQAMAGYSLGEADLLRRAMGKKIRAEME
KQRERFVSGSAGRGIEKAQADTIFDLLAKFADYGFNKSHAAAYAIVAYQTAWLKANYPTE
FLAASMTLDMGNTDKLAEFRQEAQRLGIEVVPPNINLSAREFAVKDGKIIYAMCAIKGVG
GAAVDALVAARGDRPFRSFADFASRLPVKLVNKRTLESLMAAGCFDVLEKNRARAFAAIE
SIVAEAQRVEANAQSGQNDMFGSGPSAVSLPIPEVAPWLPSERLQKEYDAIGFFLTGHPL
DDYADALKKMRVQSFSDFSRAVRSGAAAGRLAATVVSKQERRTKSGTRMGIVGLSDPSGH
YEAVIFSEGLAHYRDLLEPGTPLLMMVAAELNGEDVRVRINSCEKLDPVTARHQKGLRIF
LRSPEPIEGIARRLADGKTVDAGSGEVSLILMVEDARAEVEVSLPGKYPISPQIAGAIKA
IPGVVAIESA
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgcccgatcccggcttcatccatcttcacgtccattcctcctattcgctgctggagggg
gcgctttccattggcaagctggccgacctcgtgaaggcggatgcgcagccggccattgcg
ctcaccgatacgggcaatctgttcggcgcgctggaattctccgagaagatgtcgggcgcc
ggcatccagcccatcgccggtgtgtccctcgccctggacctgccggagccggcaggcccg
cgcggggcgatccggccgaagcggccgcgcatcgtgctgctggcccagtcggagccgggc
tggcgcaacctgatgcgactggtctcccgctcatttcttgaaaccgccagcgaggacgag
ccgcgcatcctgcccgactggctggccgatgcccatgacggcctcatcgccctcaccggc
gggccggccggccccatcgacaaggcgctggtgtccggccatccggagctggcggcggag
cggctcgacctgctcgcctcgctgttcggcgaccggctctatgtggaagttcagcgccac
gacaccgacgccgagcgcctcgccgaagccgggctgctggaactggcctatgccaagggc
cttccgctggtcgcgtccaacgagcccttcttcgccagcaagaccgattatgaggcccac
gacgggctcctgtgcatcgccgagggccggcttttgtcggaaggcgaccggcgccggctg
acgcccgagcaccgattcaagacccgcgcggaaatgctcgccctgttcgccgacctgccc
gaggccacggccaacacggtggagatcgcccggcgctgcgcctaccgggtgcgcaccgtg
aagcccatcctgccgcgcttcacctcgggtggaggggacggcgatcccctggccgaggag
gccgccgagctggagcggcaggcgaaggagggcctcgcccagcgcctcgaaaagcacggg
ccggcgccggggctggacatcgccacctatgaggagcggctcgcctacgagctttccgtc
atcaccaaaatgaagttccccggctacttcctcatcgtgtcggacttcatcaagtgggcc
aaggcccacgatatcccggtggggccggggcgtggatcgggcgccggctcgctggtggcc
tattcgctccagatcaccgacctcgatccgatccggttcggcctgctgttcgagcggttc
ctgaacccggaccgcgtgtccatgcccgacttcgacgtggacttctgccaggagcgccgc
gacgaggtgatccactacgtgcaggagcgctacggccgcgcccaggtggcgcagatcatc
acgttcggtacgctgcaggcgcgcggcgtgctccgggacgtgggccgcgtgctggagatg
ccctatgggcaggtggacaagctgtgcaagctggtgccgcagaacccggccaatccggtc
acactgaagcaggccatcgaggacgagccgcgcctccaggcctcccgcgaccaggaagag
gtggtcaagcgcgccttcgacatcgcggtgaggctggagggcctcaaccgccacgcctcc
acccatgccgcgggcatcgtgatcggcgacaggaagctccacgagctggtgccgctctat
cgcgatcccaagtccgacatgccggtcacccagtacaatatgaaatgggtggagcaggcg
ggcctggtgaagttcgacttcctgggcctgaagacgctgaccaccatcgacaaggcggtg
aagctgatccaccagcgcggcatcgatctggacatctccaagatcccgctggacgacccc
aagacctacgccatgttgggcaagggcgagacggtgggcgtgttccaggtggaaagcgcg
ggcatgcgccgggcgctggtggacatgaaggccgaccgggtcgaggacctgatcgccctc
gtggcgctctaccggcccggccccatggccaacatcccggtgtattgcgactgcaagcac
ggccgcgccaagccggactatctccatcccatgctggagccgtacctgaaggagacgttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcccaggccatggcgggttactcg
ctgggcgaggccgacctgctacgccgcgccatgggcaagaagatccgcgccgagatggag
aagcagcgcgagcgcttcgtctccggctccgctgggcggggcatcgagaaggcgcaggcc
gacaccatcttcgaccttctggccaagttcgccgactacggcttcaacaaatcccacgcc
gccgcctacgccatcgtcgcctaccagacggcctggctgaaggcgaactaccccaccgaa
ttcctcgccgcctccatgaccctcgacatgggcaacacggacaagctcgcggaattccgg
caggaggcccagcgcctcggcatcgaggtggtgccgcctaatatcaacctgtcggcccgc
gagttcgcggtgaaggacggcaagatcatctacgccatgtgcgccatcaagggcgtgggc
ggggcggccgtggacgcgctggtggcggcgcgcggtgaccggccgttccggagcttcgcg
gatttcgcctcgcgcctgccggtgaagctggtcaacaagcgcacgctggaaagcctgatg
gccgccggctgcttcgacgtgctggagaagaaccgcgcccgggcgtttgccgccatcgaa
tccatcgtggccgaggcccagcgcgtggaggcgaacgcccagtcgggccagaacgacatg
ttcggctccggcccctcggcggtctccctgcccattccggaggtggcgccctggctgccc
tcggagcggctgcagaaggaatatgacgccatcggcttcttcctcaccggccatccgctg
gacgattatgccgatgcgctgaagaagatgcgggtgcagtccttctcggacttctcccgc
gccgtgcgctcgggcgccgcggcggggcggctcgctgccaccgtggtctccaagcaggag
cggcggaccaagtccggcacccgcatgggcatcgtcggcctctccgacccctcgggccat
tacgaggcggtgattttctccgaaggcctcgcgcattatcgcgacctgctggagccgggc
acgccgctgctgatgatggtggcagccgagctgaacggcgaggatgtgcgcgtacgcatc
aattcctgcgagaagctggaccccgtcaccgcccgccaccagaagggcctgcgcatcttc
ctgcgctcccccgagcccatcgagggcatcgcccgccgcctcgccgacggcaagaccgtg
gatgcgggctccggcgaggtcagcctgatcctgatggtggaggatgcccgggccgaggtg
gaagtgagcctgcccggcaaatatcccatctcgccgcagatcgccggagccatcaaggcc
attccgggggtggtcgcgattgaatccgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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