KEGG   Xanthobacter autotrophicus: Xaut_4751
Entry
Xaut_4751         CDS       T00581                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xau  Xanthobacter autotrophicus
Pathway
xau03410  Base excision repair
xau03430  Mismatch repair
xau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Xaut_4751
   03430 Mismatch repair
    Xaut_4751
   03440 Homologous recombination
    Xaut_4751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xau03400]
    Xaut_4751
DNA repair and recombination proteins [BR:xau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Xaut_4751
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Xaut_4751
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Xaut_4751
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB ATPgrasp_N
Other DBs
NCBI-ProteinID: ABS69970
UniProt: A7IPM4
Position
5274130..5276010
AA seq 626 aa
MSSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQT
ALAMAQRTGISELLARVLAGRDVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAV
TSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPDRIFEGYGPNVPAIEQLAARG
VTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHV
CAAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTK
GLLAMRRRGRIGLTALMDAARLDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDP
AEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSDEGSVIVVSGDGWHPGVVGLV
ASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLT
VERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNG
EPVFAFPGHRISYVESFGAGHVRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHV
AGSLELDTWQGETRVALRMRDVAEPG
NT seq 1881 nt   +upstreamnt  +downstreamnt
ttgtcgtcctgctggtggcgcaggggtggtgatcgcttccggtcgctcgacgcgaggggc
tgcatctggcttgatgcgcccgtgaacatagccttgccgaatcgcctcttcctcgacgtc
gcccgttccgccaccggccgcacctggcgcgagcgcctggacgtgcgcggcgcccagacc
gccctcgccatggcccagcgcaccggcatcagcgagctgctggcccgcgtgctggccggc
cgcgacgtgccgctcgacggggtggagcaatatctcgacccctccatccgcacccttctg
ccggatcccgacaccctcactgacatgggcgccgccgtggcgcgcctgtcgcgcgcggtg
acgagcggcgagcaggtggcggtgttcggcgactatgacgtggacggcgcctgcgccacc
gccctcatggtgggcgtgctgcgggcggcgggcctcgatccactgttccacatccccgac
cgcatcttcgagggctatggccccaacgtgccggccatcgagcaactggcggcgcgcggc
gtcacgctgctggtgacggtggattgcggcaccacctccatggagccgctcgccgctgcc
cggcgcctcggcatggatacggtggtgatcgaccaccaccagtccggcgagcgcctgccg
gacgccgccgccatcgtgaaccccaaccgggaggacgacctctcgggcctcggccatgtg
tgcgcggcgggcctcgccttcatcaccgcggtggggctggtgcgggcgttgcgccagaac
ggccatttcaacaccgcccgcccggccccggacctgctggacaccctcgatctggtggcg
ctcgccaccgtggccgacgtggtgccgctgaagggcctcaaccgcgccttcgtcaccaag
ggcctccttgccatgcgccggcgcggccgcatcggcctcaccgcgctgatggacgcggcc
cggctcgacgggccgccacgcccgttccatctcggcttcctcatcggcccgcgcatcaat
gccggcgggcgcatcggcgaggcgacgctgggggcgaaattgctcctcacccaggacccg
gccgaggcccgccagatcgccgccgagctggaccggctcaacggcgaacggcaggaggtg
gagcgcgccatcctcgccgccgccgaggcggaggccgaggccgcgctgggcctcagcgac
gaaggctcggtgatcgtggtgagcggggatggctggcaccccggcgtcgtgggcctcgtg
gcgtcgcggctgaaggagcgcttccagcgccccgccttcgccatcgccttcaacggggag
accggcaccggctccggccgctcgctgcccggcgtcgacatcggccgggccgtgcgcgcg
gcgctggaggcaggactgctggtgaagggcggcggccatgccatggcggccggactcacg
gtggaacgcgcgcgcctcggtgccttgcgcgcagccttcgaggagcgcctcgccgccgac
gtggcgcgggcgcgggccgagggcacgctgtccatcgacggcgccctcaccgcgcggggg
gcgacgacggacctcgtcgagatggtctcccgcgccggcccgttcggcgccggcaatggg
gagccggtgttcgcctttcccggccatcgcatcagctatgtggagagctttggcgccggc
catgtgcgggcgcgcatctcatccccagacggcaccaccctgaaggccaccgccttccgc
tgcgccgaggagccgctcggccgcgccctgctggccgcgcgcgggcggcccctgcacgtg
gccggcagcctggaactggacacctggcagggcgagacccgcgtggcgctgcgcatgcgc
gacgtggccgagcccggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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