KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_1844
Entry
xcc-b100_1844     CDS       T00759                                 
Name
(GenBank) unnamed protein product
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
xca  Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:xca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xca03016]
    xcc-b100_1844
Enzymes [BR:xca01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     xcc-b100_1844
Transfer RNA biogenesis [BR:xca03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    xcc-b100_1844
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: CAP51197
UniProt: B0RRW2
Position
complement(2160864..2162321)
AA seq 485 aa
MPGTSVSDLPTTATAVDAPALLPLPVGRPQAPALVRGKLYIKTHGCQMNEYDSAKMADVL
AASEGLELTDNPEDADVVLVNTCSIREKAQEKVFSQLGRWKALKAGGKPVIIGVGGCVAS
QEGEAIVKRAPYVDLVFGPQTLHRLPELIRARRESGKSQVDISFPEIEKFDRLPEPRADG
PSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAY
RGAYGADAGEPAQYADLGLLIRTIAQIDGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANY
LHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFDKT
MKLIEDVGFDQSFSFIYSRRPGTPASDLEDDTPDAVKQARLARLQAHINAHAAGISQRMV
GSVQRVLVEGPSRRDANELTGKTENMRPVNFPGNPRLVGQFVDVLITEALSNSLRGRIQL
DDSAA
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgcccgggacatccgtttccgatctgccgaccacggccaccgccgtggacgcgcccgcc
ctgctgcccctgcccgttggccgcccgcaagcgcctgccctggtgcgcggcaagctgtac
atcaagacccacgggtgccagatgaacgagtacgactcggccaagatggccgacgtgctt
gccgcgtccgaaggactggagctcaccgacaatccggaagacgcggacgtggtgctggtc
aacacctgctccattcgcgaaaaggcgcaggaaaaggtgttcagccagttgggccgctgg
aaggcgctcaaggccggcggcaagccggtgatcatcggcgtgggtggctgcgtggcgtcg
caggaaggcgaagcgatcgtcaagcgcgcgccgtacgtggacctggtgtttggcccgcag
accctgcaccggctgccggagttgatccgtgcgcgccgtgagtccggcaagtcgcaggtg
gacatcagcttcccggagatcgagaagttcgaccgcctgcccgaaccgcgtgccgatggc
ccgtcggcgttcgtgtcgatcatggaaggttgttccaagtactgctcgttctgcgtggtg
ccatatacacgtggcgaagaagtcagccggccgttcgaggacgtgctggtggaagtggcg
cagctggctgcacaaggcgtgcgcgagatcaatctgctcggccagaacgtcaacgcgtat
cgcggtgcgtacggtgccgatgctggcgagccggcgcagtacgccgatctggggttgctg
atccgtaccattgcgcagatcgacgggattggccggatccgctttaccacctcgcacccg
ctggagttttccgattcgctggtcgatgcctaccgcgatgtgccgcagctggccaattac
ctgcatctgccggtgcaggccggcagcgaccgcatcctgtcggcgatgaagcgcggctac
accgcactggaattcaagtccaagatccgcaagctgcgcgcagtgcggccagacatctcg
atcagctccgacttcatcgtcggctttccgggcgagaccgacgccgatttcgacaagacc
atgaagttgatcgaggacgtgggcttcgaccagagcttctcctttatttactcgcgtcgc
ccaggtacgccggcatcggatctggaagacgacacccccgatgcggtgaagcaggcgcgc
cttgcacgtctgcaggcgcatatcaacgcgcatgccgccggcatttcgcaacgcatggtc
ggcagcgtgcaacgcgtgctggtggaaggcccgtcgcgccgtgatgccaatgagctcacc
ggcaagaccgaaaacatgcgcccggtgaatttcccggggaatccgcgcctggtgggtcag
ttcgtggatgtactgatcaccgaagcactgagcaattcgctgcgcgggcgcatccaattg
gacgacagcgcggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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