KEGG   Xanthomonas campestris pv. campestris B100: xcc-b100_2555
Entry
xcc-b100_2555     CDS       T00759                                 
Name
(GenBank) tRNA pseudouridine synthase D, probable
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
xca  Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:xca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xca03016]
    xcc-b100_2555
Enzymes [BR:xca01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     xcc-b100_2555
Transfer RNA biogenesis [BR:xca03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    xcc-b100_2555
 Prokaryotic type
    xcc-b100_2555
SSDB
Motif
Pfam: TruD RST
Other DBs
NCBI-ProteinID: CAP51915
UniProt: B0RU01
Position
complement(2964392..2965495)
AA seq 367 aa
MSDSPVLPRAHGAAVLTAAMRSVAEDFQVDELPAFDASGEGEHLLLSVRKRGQNTAYVAK
RLAQWAGIAEMGIGYAGLKDRHAVTTQRFSVHLPKRIAPDLSALDDDDMQVVEHTWHNRK
LQRGALHGNRFVLTLREVVGDQTAIDARLHAIAARGIPNWFGEQRFGRDGGNVAAALAMF
GYTRQLDGTLAPAPKRRLRNDQRSLLLSAARSALFNQVLTARVEQGDWDAPLDGEAWMLD
GSRSVFGPEPWSEVLAERLARFDIHPSGPLWGAGELRCSADAAAIEQAALSDPQSLALRT
GLEAAGLKQERRALRLRPQALAHAWLDAQTLQLTFALPPGCYATAVLWELGDVVDAARVA
PQSRSEG
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgagcgattcacccgttttgccgcgcgcgcatggcgccgcggtgctcactgcggcaatg
cgcagcgttgccgaggatttccaggttgatgagttgcccgcgttcgatgcatcgggtgaa
ggcgagcatctgctgctgagcgtgcgcaagcgtggccagaacaccgcttacgtggccaag
cgtttggcgcagtgggccggcattgcggagatgggcattggctacgcgggtctgaaggac
cgccacgcggtgaccacgcaacgcttcagcgtacatctgcccaagcgcatcgccccggac
ctgagcgcgctggacgatgacgacatgcaggtggtggagcacacctggcacaaccgcaag
ctgcagcgcggcgccttgcatggcaatcgtttcgtgctgacgctgcgcgaggtggtgggc
gatcagacggccattgatgcgcgcctgcacgcgatcgccgcgcgcggcatccccaactgg
tttggcgagcagcgcttcggccgcgatggtggcaatgtcgccgcggcattggcgatgttc
ggttacacgcggcagctggatggcacgctcgcgcccgcacccaagcgtcgcctgcgcaac
gatcaacgctcgctgctgctgtcggcagcacgctcggcactgttcaaccaggtgctgact
gcgcgcgtggaacagggcgattgggatgcgccactggacggcgaggcctggatgctggac
ggctcacgcagcgtgttcggtcccgaaccctggagcgaggtgttggccgagcgtctggcg
cgtttcgacattcatcccagcggcccgttgtggggcgccggcgaattacgctgcagcgct
gatgccgcggcgattgaacaggcggcactgtcggatccgcaatcgcttgcgttgcgcacg
ggcctggaagcggccggcctcaagcaggagcgccgcgcgttgcggctgcgtccgcaggcg
ttggcacatgcctggttggacgcgcagacgctgcagctcaccttcgccttgccaccgggc
tgctacgcaactgcggtgttgtgggaactgggcgatgtcgtcgatgcagcgcgcgttgca
ccgcagtcgcgttccgagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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