KEGG   Xanthomonas campestris pv. campestris 8004: XC_3514
Entry
XC_3514           CDS       T00247                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
xcb  Xanthomonas campestris pv. campestris 8004
Pathway
xcb00300  Lysine biosynthesis
xcb00550  Peptidoglycan biosynthesis
xcb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xcb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    XC_3514
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    XC_3514
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:xcb01011]
    XC_3514
Enzymes [BR:xcb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     XC_3514
Peptidoglycan biosynthesis and degradation proteins [BR:xcb01011]
 Precursor biosynthesis
  Amino acid ligase
   XC_3514
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase Scaffolding_pro
Other DBs
NCBI-ProteinID: AAY50557
UniProt: Q4UQW6
Position
complement(4175058..4176545)
AA seq 495 aa
MSRAMALSQLLPDVALARDVQVSGLVMDSRAVRPGDAFVAIAGFGAHGLGFAAQALASGA
SAILFEPPAPADLPVPADAIAVPGLRARLGVLADHFHGAPSQAMRMIGVTGTNGKTSTVQ
LLAQALTLLGTPTGTIGTLGVGLYGAAVPTGFTTPLVLQTHAELAQLRDAGAQAVAMEVS
SHALDQGRVDAVQFDVAVFTNLTRDHLDYHGDMAQYGAAKAKLFARAGLRAAVVNLDDAF
GRTLFAALDPALHAIGVSSRAQAGATVQAQDLQLDHHGIQFTLHIGEAAHPVRSPLLGRF
NVDNLLAVAGALHALDIAPAQIAEVLGRLQPIHGRMNRLGGAHGAPLVVVDYAHTPDALE
QALTSLRSHAQDRLICVFGCGGERDTGKRPQMAAIAEVTADVAIVTDDNPRGEDGDVIVA
DILRGFARPDAAIVQRDRAAAIHQAISMAGADDIVLIAGKGHEPYQEVAGVRHAFDDAAV
AAQALLPRTGLGVRV
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtgagccgcgccatggcactgtcgcagctgctcccggacgtggcgcttgcacgcgatgtg
caggtgtccggcctggtgatggacagccgtgccgtgcgcccgggcgatgccttcgtggcc
atcgccggcttcggtgcgcatgggctgggatttgccgcacaggcgctggccagcggtgca
tccgccatcctgttcgaaccgccggcgccggccgacctgccagtgccggccgacgcgatc
gccgtgccggggttgcgcgcgcgcctgggcgtgctggccgaccacttccacggtgcgccg
tcgcaggcgatgcgcatgattggtgtcaccggcaccaacggcaaaacctccacggtgcag
ctgctggcgcaggcgctgacgctgctcggcacccccaccggcaccattggcacgctgggc
gtgggcctgtacggcgctgcggtgccgaccgggttcaccacgccgctggtgttgcagacc
cacgccgagctcgcgcaactgcgcgatgccggcgcgcaggcggtggcgatggaagtcagt
tcgcatgcactcgatcagggccgcgtggatgcggtgcagttcgacgtggcggtgttcacc
aatctcactcgcgaccatctcgattatcacggcgacatggcgcagtacggtgcggccaag
gccaagctgttcgcacgcgccgggttgcgcgcagcggtcgtgaacctggacgacgccttc
ggccgcacgttgtttgcggcgctggatccggcactgcacgccatcggcgtgagctcgcgt
gcgcaggccggtgccacggtgcaggcgcaggatttgcagctcgatcaccacggcatccag
tttacgttgcacatcggcgaagcggcgcacccggtgcgctcgccgctgctgggccgtttc
aacgtggataacctgctggccgtggccggcgcgctgcacgcgctcgacatcgcaccggcg
cagatcgccgaagtgctgggccgcttgcagccgatccacggccgcatgaatcgcctgggt
ggtgcgcatggcgcgccgctggtggtggtggactacgcacacacgcctgacgcactggaa
caggcgctcaccagcctgcgttcgcatgcgcaggatcggttgatctgcgtgttcggctgc
ggcggcgaacgcgacaccggcaagcgcccacagatggctgccattgccgaggtcaccgcc
gatgtggcgatcgtcaccgacgataatccgcgcggcgaagatggcgatgtgatcgttgcc
gacatcctgcgcgggtttgcgcgtccggatgcggcgatcgtgcagcgcgaccgtgctgcc
gccatccaccaggccatcagcatggccggcgcggacgacatcgtgctgatcgccggcaag
ggccatgagccgtatcaggaagtggccggcgtgcggcatgccttcgacgatgcagcggtg
gctgcgcaggcgttgctgccgcgcaccgggctgggggtgcgggtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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