KEGG   Xanthomonas citri subsp. citri Aw12879: XCAW_01652
Entry
XCAW_01652        CDS       T02519                                 
Symbol
topA
Name
(GenBank) Topoisomerase IA
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
xci  Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:xci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xci03032]
    XCAW_01652 (topA)
Enzymes [BR:xci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     XCAW_01652 (topA)
DNA replication proteins [BR:xci03032]
 Prokaryotic type
  DNA Topoisomerases
   XCAW_01652 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim zf-C4_Topoisom Toprim_4 Toprim_2 Zn_ribbon_recom
Other DBs
NCBI-ProteinID: AGI07449
Position
1861031..1863043
AA seq 670 aa
MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS
IEQLPIIPQRWQVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYR
GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ
AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWVSPDTCT
DDSGRCLQQPVAQQAAQQLRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDV
QETLDIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQ
RSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIRAHYLAQFLPHHEFDRTVANL
SCGQQTLTATGKQVVVKGWRLVLAEPQPEEDSDTAARSQVLPALREGVSCQVADADLKAL
KTQPSRPYTQGELVKSMKGVAKLISDPRLKQKLKDTVGIGTEATRANIISGLIARGYLMK
KGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLI
TQYASASLSIKVPHGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGTSKRVAS
RSRRGCRKDS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgcggctgttcttgtgcgagaagccttcccagggcaaagacattggccggattctcggc
gccacgcaacgcggtgaaggctgcctcaacggttccggcgtcaccgtcacctggtgcatc
ggccatctcgtagaggcggcggcacccgaagcctacgacgaacagctaaagcgctggtcc
atcgagcagttgcccatcattccccagcgttggcaggtcgaggtcaaaccgaaaaccgcc
acgcaattcaaggtcgtcaaggcgctactggcgaaggcaacacagcttgtcatcgccacc
gatgccgaccgcgaaggcgaactgatcgcccgcgagatcattgacctgtgcggctaccgc
ggccccatcgagcggctgtggttgtcggcactcaacgatgcgtccattcgcgccgcgcta
ggcaaactccggccatcggccgagacgctgccgatgtactactcggcactagcgcgctcg
cgtgcggactggcttgtgggcatgaacctcagtcggttgttcacggtgctgggtcggcaa
gccggctacgacggagtgctgtcggtcggtcgcgtccagaccccgacgctcaagctggtc
gtggaccgcgaccgcgagatcgcggccttcgtgtccgtgccgtactgggccatcgacgtg
tacctgaccacaagcggccaagccttcaccgcgcagtgggtttcgcccgacacctgcacc
gacgactcgggccgctgcctgcagcagccggtggcacagcaggcggcgcagcagctccgc
gccaccggcagtgcccaggttgtctcggtcgaaaccgagcgcgtgcgtgaaggcccgccg
ctgccgttcgacctgggcaccttgcaggagttgtgttccaagcagcttgggctggatgtg
caggaaaccttggacatcgctcaggccctgtacgaaacgcacaaggccacgacctatccg
cgttcggattccggctacctgccggagagcatgtttgccgaagtccccatagtcctcgac
agcctgctcaagaccgatttctcgctgcgcccgatcattgaccaactcgaccgcacacaa
cgctcacgcgcttggaacgacgcgaaggtgtccgcgcaccacggcatcatcccgacgctc
gaaccggcgaacctctcggccatgagcgagaaggaactggcggtgtacaagctcatccgg
gcgcactacctcgcgcagttccttcctcaccacgagttcgatcgcacagtggcgaacctc
tcttgcggccagcagacgctgacggccacaggaaagcaggtggtcgtcaagggctggcgc
ctggtgttggccgaaccgcaacccgaggaggatagcgacaccgcggcgcgcagccaggtg
ctgcccgcgctacgcgagggcgtgtcatgccaggtagcagatgccgatctgaaggcgctc
aagacacagccatctcgaccctacacgcagggcgaattggtcaagtccatgaaaggcgtc
gccaagctgatctcggatccgcgcttgaaacagaagctcaaggatacggtcggcatcggc
accgaagcgacacgggccaacattatcagcggcctgatcgcacgcggctatctcatgaag
aaggggcgcgcgattcgcgcctcggatgcggcattcaccctcatcgacgccgtgcccgca
gcgattgccgaccccgggaccaccgccgtatgggaacaagcgctagacatgatcgaagcg
ggacaactcacgctggacgtgttcatcggcaagcaggccgcatggatttcgcagttgatc
acgcagtacgccagcgcgtccctgtcaatcaaggttccccatgggccggcttgcccgcag
tgcggcgcacccacgcgccagcgcagtggcaagagcggcccgttctggtcgtgcagtcgc
tatccagactgcaaaggcacgctgccggtcgagtccggcacgtccaagcgcgtagcctca
cgctcgcgccgtggctgccgaaaagactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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