KEGG   Xanthomonas citri subsp. citri UI6: J158_02795
Entry
J158_02795        CDS       T03894                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
xcj  Xanthomonas citri subsp. citri UI6
Pathway
xcj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    J158_02795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcj03400]
    J158_02795
DNA repair and recombination proteins [BR:xcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J158_02795
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      J158_02795
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 UB2H
Other DBs
NCBI-ProteinID: AJY87169
Position
complement(3078961..3080982)
AA seq 673 aa
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQRPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYEVRESAGEVTELVVRPTGLID
PVVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVERPIADIMEGA
RDDAAEKKSGKGRSKSRHVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKAASLG
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaccgaccgttttcagctcgtatccccttattcgccagcgggcgaccagcctgcagcc
atcgacaagctggtcgccaacttcgaggctggcttggccaagcagaccttgttgggtgta
acgggctcgggcaagacctacaccattgccaatgtggtccagcaggtgcagaggccgacg
ctggtgatggcgccgaacaagacgttggcggcgcagctgtacggcgagttcaagtcgttc
ttcccgcataacgcagtcgagtacttcgtcagctactacgactactaccagccggaggct
tatgtgccatcgtctgacaccttcatcgagaaggacagttcgatcaatgaacacatcgag
cagatgcgcttgtcggcgaccaagaccctgctgtctcggcgcgattcgctggtggtggcg
accgtgtcggcgatctatggccttggcgcgccggaggactacctatcgctgcggctgatc
ctgtcggttggcgagcacatcgatcagcgccagttgatccgccatctcaccgatttgcaa
tacacccgcaacgagttcgaactgacgcgtggcgcctttcgcgtgcgcggcgaggtgttg
gatgtgttcccggccgagtcggataccgaagccttgcgcatcgagttgttcgatggcgac
atcgaacaactgacgttgttcgatccgctcactggcgaaaccttgcgcaagttgcagcgc
tacaccgtgtacccgaaaacccattacgccacgacgcgtgagcgtaccttgagtgcggtg
gacaccatcaaggaagagctgaaagagcgcctggagcaactctactcgcagaacaagctg
gtcgaggcgcaacgcctggcgcagcgcacgcaattcgatctggaaatgatggccgaggtt
gggttttgcaacggtatcgaaaactactcgcggcatctcaccggcaaggcgccgggagag
ccgccgccgaccttgttcgactacctgccgcccgacgcactgctggtcatcgacgagtcg
catgtgacgatcccgcagatcggtgcgatgtacaagggcgaccgttcgcgcaaggaaacg
ctggtggagttcggttttcggctgccctccgcactggacaaccgtcccttgcgtttcgaa
gagtgggaggcgcgttcgccacgcagcatctacgtttcggcaacgcccggtccttacgag
gtgcgcgagtcggctggcgaagtcacggagctggtggtgcgcccgaccgggttgatcgac
ccggtcgtggagatccgcccggtcggcacacaggtcgacgacctgatgtccgaagtccac
gagcgcatcaagcttggcgatcgcgtattggtgaccacgttgaccaagcgcatggccgaa
aacctcaccgagtacctgggcgaacacgggattcgggtgcgctacctgcattcggatatc
gacaccgtcgagcgcgtggaaatcattcgcgatctgcgtctgggcaagttcgatgtactc
gtgggcatcaatctgctgcgcgagggtttggacatgccggaagtctcgctggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgaccggttcgctgatccagaccattggc
cgtgccgcacgcaatctgcgcggcaaggccatcctgtatgccgacaagatgacgcgttcg
atgcaggcggcgatcgacgagaccgatcgtcgccgtgagaagcaggtcgagtacaacctg
gaacatggcatcactccgaaatccgtcgagcggccgatcgccgacatcatggaaggcgcg
cgcgacgatgcggccgagaagaagtcgggcaagggccgttcgaaatcacgccatgtagcc
gaggagacgcccgattaccgtgccatgaagcctgcggaaatcgctggcaagctcaagagc
ctggagcagaagatgtatcagcacgcaaaggatctggagttcgaggccgcagcccagatt
cgcgaccagatccagaagttgaaagcggcaagtctgggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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