KEGG   Xanthomonas campestris pv. raphani: XCR_0121
Entry
XCR_0121          CDS       T01872                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    XCR_0121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcp03400]
    XCR_0121
DNA repair and recombination proteins [BR:xcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     XCR_0121
SSDB
Motif
Pfam: Ku QueG_DUF1730
Other DBs
NCBI-ProteinID: AEL05051
UniProt: G0CHN7
Position
125840..126781
AA seq 313 aa
MARPIWTGTLSFGLLNVPVSLMSGERKVDLHFRMLDSRDKKPIRFERVNADTGDEVPWKE
IVKAFEYDKGSYVIVEEQDIRSAAPESHETVEVETFVDAADIDPRYFEKPYILVPGKKAE
KGYVLLRETLRDTGKVGIAKVVIRTREYLAAVMPQGDALILLLLRYQQEVVDPEDFKLPS
GAVSEYRITAKEQEMAKQLIESMSGKWQPEDYHDEFRGKLEQILRKRIQAKGGTTQVDDE
PAPHEDATTNVVDFMSLLQKSLQANTRTPAKKTTAAADTAPAKKTATKKAAKKVTKKTAT
KATKKAAPRRKAG
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcacgaccgatctggaccggaacgctgtcgtttggcctgctcaacgtgccggtctcg
ctgatgtcgggcgagcgcaaggtggacctgcatttccgcatgctcgattcgcgcgacaag
aagcccatccgcttcgagcgcgtcaacgccgacaccggcgacgaagtgccgtggaaggaa
atcgtcaaggccttcgagtacgacaagggcagctatgtgatcgtcgaggagcaggacatc
cgctccgcagcgccggaaagtcacgagacggtggaagtcgagacctttgtcgatgccgcg
gacatcgacccgcgctacttcgagaagccctacatcctggtgcccggcaagaaggccgaa
aaaggctatgtgctgctgcgcgagaccttgcgcgataccggcaaggtgggcattgccaag
gtggtgatccgcacccgcgaatacctggccgccgtgatgccgcagggcgatgcgttgatc
ctgctgctgctgcggtatcagcaggaagtggtggacccggaagatttcaagctgccgtcc
ggggcggtgagcgagtaccgcatcaccgccaaggagcaggagatggccaagcagctgatc
gagtcgatgtccggcaagtggcagccggaggattaccacgacgagtttcgcggcaagctc
gagcagatcttgcgcaagcgcatccaggccaagggcggcaccacgcaggtggacgacgaa
ccggccccgcacgaagacgccaccaccaacgtggtggacttcatgtcgttgctgcaaaag
agcctgcaagccaatacgcgtaccccggcaaagaagaccacggctgcggctgacacggcg
ccggccaagaaaaccgccaccaagaaggcggccaagaaagtcaccaagaaaaccgccacg
aaagccaccaagaaggcggcgccgcggcgcaaggccgggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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