KEGG   Xanthomonas citri pv. citri MN10: J162_04472
Entry
J162_04472        CDS       T03779                                 
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
xcw  Xanthomonas citri pv. citri MN10
Pathway
xcw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xcw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    J162_04472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcw03400]
    J162_04472
Enzymes [BR:xcw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     J162_04472
DNA repair and recombination proteins [BR:xcw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     J162_04472
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_11 Viral_helicase1 SH3_13 UvrD-helicase AAA_22 Helicase_RecD UvrD_C RecD_N nSTAND3 T2SSE AAA_16 DEAD AAA_28 SLFN-g3_helicase Rad17 Terminase_6N ATPase Phageshock_PspD TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AJZ06564
UniProt: A0A0U5F7T1
Position
complement(5073178..5075235)
AA seq 685 aa
MSLLADLQAKSHLRTLDHAFAQSLRRLRPDTPDTVLLAAALASLAVANGHAGLDPRRPRL
LVDADVAWPAADAWMAQLQASPWIAQPDDPLAAAASDAPLVLEHGLLYLRRYREYEARLA
AGLTRIASDTLPATESAVLAAVFAALFPSATTGQDRQAQAAALALRRALLLITGGPGTGK
TTTIARLLLLRLAQAHAAGQPPPRIALAAPTGRAAERMAESLRIALARAIEQGLPAEHQG
ASPLPPAGEGARRAGEGTAPTDFSWHSALPTGASTLHRLLGVIPDSPHFRHDADNPLPFD
LIVVDEASMVDLPLMCKLVDAVADGTQLILLGDADQLPSVEAGDVLAAILRAAGPGDTLP
PDDARALQPLLGNAPVTAPAASTPVGHLAGHRVHLLRGYRQAADFALAPLADAVRIGDAE
TALSLLRSGTLPGVHFHEDGDDPLSLGREALLAHWQALTATNDPADALRQAGRLRLLTAV
RAGPQGARGLNARIEQLLAESGSGARRLGAASPWFHGRLLLITENSYRHGLFNGDVGICL
RSEASPASVRDPQAALVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDEVWL
QLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRSALARHAARISGLAWRLGAEQMQP
TADAASPLRATTPTALGNPIQGSLF
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgagcctgctcgccgatctgcaggccaagagccatctgcgcacgctcgaccacgcgttc
gcgcagagcctgcgtcggttgcgtccggacacgcccgataccgtgctgctggccgctgcg
ctggcctcgctggccgtggccaatggccatgccggcctcgatccccgccgcccacggctg
ctggtcgatgcagacgtcgcctggccggcggccgacgcctggatggcccaactgcaggcc
tcgccgtggatcgcccaacccgacgatccgctggctgctgcggccagcgacgcacccctc
gtccttgagcacggcctgctctacttacgccgctatcgcgaatacgaagcccgcctggcc
gccgggttgacccgcatcgcgtcagacacgttgccagcgaccgagagtgctgtcctcgct
gcggtgtttgctgcgctgtttcccagcgcgaccaccggccaggatcgccaggcccaggcc
gccgcgctggcgctgcgccgcgccctgctgctgattaccggcggccccggcaccggcaag
accaccaccatcgcccgtctgctgctgctgcgtctcgcccaggctcatgccgccggccaa
ccgcccccccgcatcgcgctggccgcgcccaccggccgcgctgccgagcgcatggccgaa
agcctgcgcatcgcgctggcgcgcgcgatcgagcagggcttgcccgcagaacatcaaggc
gcgtcccctctcccgcctgcgggagagggtgcccgcagggcgggtgagggcaccgctcct
accgacttctcctggcacagcgccctgcccaccggcgccagcaccttgcatcgcctgctg
ggcgtgattccggattccccgcacttccgccacgacgccgacaacccgctgccgttcgac
ctgatcgtcgtcgacgaagcgtccatggtcgacctgccgctgatgtgcaagctggtcgat
gcggtggccgatggcacccaattgatcctgcttggcgatgccgaccaactgccctcggtg
gaagccggcgacgtactcgccgccatcctgcgggccgccggtcccggcgacacgctgccg
ccggacgatgcgcgcgcgctgcaacccttgttgggcaacgcgccggtgaccgccccagcc
gccagcacacccgtcggtcacctcgccggccaccgcgtgcacttactacgcggctaccgc
caggccgccgacttcgccctggcgccgctggccgatgccgttcgcattggcgatgccgag
accgcactgtcgctactgcgcagcggcacgctgccaggcgtgcacttccacgaagacggc
gatgacccattgagcctgggccgtgaggccttgctcgctcactggcaggcgctgaccgcg
accaacgatccggccgatgccctgcgccaggccggccgcctgcgcttgctcaccgcggtg
cgcgccggcccgcaaggcgcgcgcggcctcaacgcccgtatcgaacaactgttggccgaa
agtggctccggtgcccgccgcctcggtgcggcctcgccctggtttcacggccgcctgctg
ctgatcaccgaaaacagctatcgccatggcctgtttaacggtgacgtcggcatctgtctg
cgcagcgaagccagtcccgcctcggtgcgcgacccgcaagccgccctggtcgcctggttc
gaaggcgacggcgacggccaggtgcgcggcttccaccccgccgcactgcccgcacacgaa
agcgccttcgccatgaccgtgcacaaggcccaaggcagcgaattcgacgaggtctggctg
caactgcccacccgcgatgcccgcgtactcagccgcgaactgctctacaccggcatcacc
cgcgcccgccgcgccctgcacctggccggcagcgaagcggtcatccgtagcgcactggca
cgccacgccgcacgcatctcgggattggcatggcggctgggtgcggagcagatgcaaccc
actgcggatgctgcatcacctttgcgagcaacaacgccaaccgcattgggcaatcccatc
cagggctctctattctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (32)   

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