KEGG T00692: XfasM23

Xylella fastidiosa M23: XfasM23_0954

Entry

XfasM23_0954      CDS       T00692

Name

(GenBank) Deoxyribonuclease V

K05982

deoxyribonuclease V [EC:3.1.21.7]

Organism

xfn Xylella fastidiosa M23

Brite

KEGG Orthology (KO) [BR:xfn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfn03400]
    XfasM23_0954
Enzymes [BR:xfn01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.7  deoxyribonuclease V
     XfasM23_0954
DNA repair and recombination proteins [BR:xfn03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     XfasM23_0954

SSDB

Motif

Pfam:

Endonuclease_5

Other DBs

NCBI-ProteinID:

ACB92386

UniProt:

B2I4U1

Position

1118463..1119251

AA seq 262 aa
MIVTSGRDCLYTLLISDIGMMVFMKISSIDSIFAAWDGSITEARRLQSDMAERIVLKDEP
NLLSEPTLLAGFDVGFEDEGRTTRAAAVLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRE
LPALLQALTQLSRIPALVFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKKRLVGDFVEP
GTAFGEHTPILLHGTQVGWALRSKMHCKPLIISPGHKVSLHSALTWTQRCLTGYRLPEPT
RQADRLASRRGQKIVSDLPSLL

NT seq 789 nt +upstreamnt +downstreamnt
atgattgtaacgtcaggtcgagattgcctgtatacgctcttaatatctgatataggcatg
atggtatttatgaagatttcatccattgattctatctttgcagcctgggatggcagtatt
accgaggcgcgacgcttgcaaagcgatatggccgaacgcattgtgcttaaggacgagcct
aatctattgtctgaaccaacattactggctggttttgacgttggctttgaggacgaagga
cgcacgacacgggctgctgctgttttaatgaatgcaggcgatttaaggttgttagaaacc
catgtcgtacgtgtaccaacgtcaatgccctatgtgcctggactcctcagctttcgcgag
ttgcctgcactcctgcaagctctgacccaattgtcacgaattccagcacttgtatttgta
gatggacatggaatcgcgcatccacgtcggctcgggatcgccgcgcattttggcttagtg
accaacctaccttgtatcggcgtagctaaaaagcgcctcgttggcgactttgtcgaacca
ggtaccgccttcggtgagcacactccgatcctattacatgggacccaggttggctgggca
ttgcgcagcaagatgcactgcaaaccgctgattatttcaccaggccataaagtttcactt
catagcgcgcttacatggacccagcgctgtcttaccggctatcgtctaccagaacccact
cggcaagcggatcgtctggcatcgcgacgtggtcaaaaaatcgtcagtgacttaccgtcc
ctactataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF

DBGET integrated database retrieval system