KEGG   Xanthomonas fragariae: BER92_11480
Entry
BER92_11480       CDS       T04667                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
xfr  Xanthomonas fragariae
Pathway
xfr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BER92_11480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfr03400]
    BER92_11480
DNA repair and recombination proteins [BR:xfr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BER92_11480
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH_2 Inhibitor_I36
Other DBs
NCBI-ProteinID: AOD15237
UniProt: A0A1Y6GWR1
Position
complement(2537177..2539033)
AA seq 618 aa
MSARPQADFDGKAFAAQLSTAPGVYRMYAGDDTLLYVGKAGALRKRVSSYFNGTPKNARL
TSMLSQVARMDVTVTRSEAEALLLENQLIKSLSPRYNVSLRDDKSYPYVLLTREDWPRIA
LHRGPRAVQGRYFGPYTGVTGVRETLSLMHKLFKLRSCEDSVFRNRSRPCLQYQIGRCSA
PCVNLVVAPDYAESVRRATMFLEGKSDQLGEEIMQSMQQASEALEFERAARLRDLLSSLR
SMQNRQYVDGRAADLDVLACATQSSQACVLLLSFRDGRNLGTRSFFPKTNGEDSADEILG
AFVSQYYAEHSPPREILLDREIPESELIEAALSTAAEHKVALKWNVRGERAGYLLLATRN
AQLTLVSELTSQSAQHARSEALREMLGLAEQVKRVECFDISHTMGEATVASCVVFDASGP
VRGQYRRFNISGITPGDDYAAMRQAIERRFRRAVEENGVLPDVLLIDGGAGQLAQAQAAL
ADLGIENISLVGVAKGEERRAGHEALIMADGRELRPGVASPALQFIQQVRDEAHRFAITG
HRGRRQKARMTSKLEDIPGIGPRRRASLLKHFGGLVGLKAAGEAEIARVEGVNAALAARI
YANLHGLALPDAAGESSP
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgagcgcaaggccccaagccgatttcgatggaaaggcgtttgctgcgcaattgagcacc
gcgcccggcgtctatcgcatgtatgcgggcgacgacaccttgctgtacgtcggcaaggct
ggcgcgctgcgcaagcgcgttagcagctatttcaacggcaccccgaaaaatgcgcggctg
acctcgatgttgtcgcaggttgcgcgcatggacgtgaccgtcacccgcagcgaagccgag
gcgctgctgctggaaaaccagctgatcaaatcattgtcgccgcgctacaacgtgtcgctg
cgcgacgacaaaagttatccctatgtgctactgacgcgcgaagactggccgcggattgcg
ctgcaccgtggcccgcgtgccgtgcaagggcgttattttggcccgtataccggcgtcacc
ggcgtgcgcgagacgctgagcctgatgcacaaactgttcaagctgcgcagctgcgaagac
agcgtatttcgcaaccgctcgcggccgtgcctgcaataccaaatcggccgctgcagcgcg
ccgtgtgtgaacttggttgtcgcgcccgactatgccgagtcggtacgacgcgccacgatg
tttctcgaaggcaagagcgaccaactcggcgaagagatcatgcagtcgatgcagcaagcc
agcgaagcgctcgaattcgagcgcgccgcgcgcctgcgcgacctgctctcgtcgctgcgc
agcatgcagaaccgtcaatacgtggacggccgcgccgccgatctggatgtgctggcgtgc
gccacacaatccagtcaggcctgcgtgttgctgctgagcttccgcgacggccgtaatctc
ggcacacgttcgtttttccccaagaccaatggagaagacagcgccgacgaaatcctgggc
gcgttcgtgtcgcagtactacgctgaacactcgccgccgcgcgagattttgcttgatcgc
gagattccggagtccgaattgatcgaggccgcgctcagcaccgcggccgaacacaaggtg
gcgctgaagtggaacgtgcgtggcgagcgtgcgggctatctgctgcttgccacccgcaac
gcgcagctgactctagtgtccgagctcaccagccagagcgcgcagcacgctcgcagcgag
gcgctgcgcgagatgctcgggcttgctgagcaagtcaaacgggtggagtgcttcgacatc
agccacactatgggcgaggcgacggtggcctcgtgcgtggtattcgatgccagcggaccg
gtgcgcgggcagtatcggcgtttcaatatttctggcatcaccccgggcgacgactacgcc
gcgatgcgtcaggccatcgaacgccggtttcgacgtgcagtggaagagaacggcgtgcta
cccgatgtgctgctgatcgacggcggcgctggtcagttggcacaagcgcaagccgcgctc
gctgacctcgggattgagaacatttcgctggtcggcgtagccaagggcgaggagcgcagg
gcagggcacgaggcgctgatcatggccgatggccgcgaactgcgcccgggcgtggcatcg
ccggcgctgcagttcatccagcaggtgcgtgacgaagcgcaccgctttgcgatcaccggt
caccgcggtcgccggcaaaaggcgcgcatgacgagcaagctcgaagatatccccggcatc
ggcccacgccgtcgggcaagtctgctcaagcatttcggcggcttggtcgggctcaaggcc
gctggcgaggcggagattgcgcgggtggagggggtcaatgccgcacttgccgcgcgaatc
tacgctaacctgcacgggctggcgcttcccgatgcggcaggcgagtcgagtccgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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