KEGG   Xylella fastidiosa Temecula1: PD_0473
Entry
PD_0473           CDS       T00113                                 
Symbol
clpX
Name
(GenBank) ATP-dependent Clp protease ATP binding subunit Clpx
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
xft  Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:xft00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:xft03110]
    PD_0473 (clpX)
Chaperones and folding catalysts [BR:xft03110]
 Heat shock proteins
  HSP100
   PD_0473 (clpX)
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small AAA_5 Mg_chelatase RuvB_N AAA_22 MCM Sigma54_activat Sigma54_activ_2 AAA_7 AAA_18 AAA_14 T2SSE AAA_16 AAA_23 ResIII TIP49 AAA_24 IstB_IS21 AAA_33 ABC_tran FtsK_SpoIIIE DEAD AAA_30 NACHT AAA_28 nSTAND3 AAA_29 TsaE AAA_PrkA AAA_25 AAA_15 SMC_N RNA_helicase G-alpha AAA_21
Other DBs
NCBI-ProteinID: AAO28350
UniProt: Q87E50
Position
565505..566785
AA seq 426 aa
MSEDRQSRSGDGNKILYCSFCGKSQREVRKLIAGPSVFICDECVELCNDIIREELEEKSQ
SARSSLPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRHKNDDIELAKSNILLV
GPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLHKCDYDVEKAQH
GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTKNILFICGGAFAGLDKVIQQRCNEVGGIGFGVKVKSSESKRDVGKVLAGVEPEDLIKF
GLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFEMENVELEFRQDALSAV
ARKALKRKTGARGLRTIVELVLLDTMYELPSQEGISKVVVDESVIENKSEPYLIYQTMPA
KVASGE
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgagcgaagaccggcaaagccgttctggtgacggaaataagattctttactgctcattc
tgcggtaaaagccagcgtgaggttcgcaagctgatcgcaggtccaagcgtattcatttgt
gatgaatgcgttgagttgtgtaacgatattattcgcgaggaactggaagagaagtcgcaa
tctgcgcgttccagtttgcctaagcccaaggagatacttgaggttttggatcagtatgtc
attggccagcagcgtgctaagaggactcttgctgtagccgtctacaatcattataaacgg
atcgaaagtcggcataagaatgacgacatcgaattggctaaatctaatattttgttggtt
ggcccaacaggctccggcaagacattgcttgccgagacattggcgcgtttgctgaatgtg
cctttcacgattgccgatgcaaccacattgactgaggctggctatgttggtgaggacgtg
gagaatattattcagaagttgttacataagtgtgattacgacgttgaaaaggcgcaacat
gggatcgtctacattgatgaaatagataagatttcccgtaagagtgagaatccatcaatt
acccgagatgtttctggtgagggtgtgcagcaggcattgctgaaattgatagaaggtacg
gttgcttctgtgcctcctcagggtggtcgcaagcatccacagcaggaattcctgcaggtc
gataccaaaaatattttattcatctgtggcggtgcttttgctggtctagataaagtgatc
caacagcgttgcaatgaagttggtggtattggctttggtgttaaggtcaaaagctcagag
agtaagcgcgatgttggtaaggtactagctggtgtcgagccagaggacctgattaagttt
gggttaatccctgaattcgttgggcgattgccagttgtagctacacttgatgagctggat
gagtcggctttggttaaaattttaaccgagccaaagaacgctattacaaagcagttcaaa
aagctgtttgagatggagaacgtagagttggagttccgtcaggacgcgctttcagcagtg
gctaggaaagctcttaagcgcaagactggtgcgcggggtctccgtactattgttgagttg
gttctgctggataccatgtacgaacttccttctcaggaaggtattagtaaggttgttgtc
gatgaatcggttattgaaaataaatctgagccttatctgatttatcaaacgatgcctgca
aaggttgcttccggcgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (38)   
   Pfam (38)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system