KEGG   Xylella fastidiosa Temecula1: PD_2071
Entry
PD_2071           CDS       T00113                                 
Symbol
hsdS
Name
(GenBank) type I restriction-modification system specificity determinant
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
xft  Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:xft00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xft02048]
    PD_2071 (hsdS)
Enzymes [BR:xft01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PD_2071 (hsdS)
Prokaryotic defense system [BR:xft02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PD_2071 (hsdS)
SSDB
Motif
Pfam: Methylase_S RBD-FIP DUF2774 Arylsulfotrans
Other DBs
NCBI-ProteinID: AAO29894
UniProt: Q879W9
Position
complement(2453187..2454521)
AA seq 444 aa
MAVASVYPNYRQPKMRWLPAVPEHWNEQRAKTFFREVDERSKTGQEELLSVSHLTGVTSR
SQKNVTMFKAASYVGSKLCRPGDIVINTLWAWMAALGASRHVGIVSPAYGVYRPHHADSF
NPAYLDYLLRTRAYVAEYIGRSTGIRSSRLRLYPNQFLDIALIQPPRPEQDQIVAYLRAQ
DAHIARFIKAKRDLIKLLTEQKLRIIDHAVTRGLDASVALKPSGIEWLGDVPVHCRIERL
KWVCRFTYGDSLSDANRRQGNVPVYGSNGPVGMHDVANVVGPCIVIGRKGSFGKVNYSES
DLFAIDTTYFVDKKCTKANIRWLYYVLIWCRLDRISKDSAVPGLDRTDALNTLVPVPDGA
EQEQIAKQLDIETAEVNDAITKVEEEITLIREYRDRLITDVVTGQVDVRGWQPDVEDVVE
DAVLAALGDDQEEMTEQEDDDDED
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggcggtggcgagcgtgtatccgaactaccggcagccgaagatgcgctggctgcccgct
gtgccggaacactggaacgagcaacgcgccaaaactttcttccgcgaggtggatgagcgt
tcgaagaccggacaggaagaactgctgtcggtgtctcacctcaccggcgttacttcgcgc
agccagaagaatgtcacgatgttcaaggcagcgagctacgttggctccaagctgtgccgc
cccggcgacatcgtcatcaacacgctgtgggcgtggatggcggcgcttggtgcgagcagg
cacgtgggcatcgtcagtcctgcctatggcgtgtaccgcccgcaccacgccgacagcttc
aacccagcgtatctcgattacctgttgcgcacccgcgcctacgtggccgaatacatcggg
cgctcgaccggcatccgatcctctcgtttgcgcctgtacccgaaccagttcctcgacatt
gctctgatccagcccccacgccccgagcaagaccaaatcgtcgcctacctgcgggcgcag
gacgcgcacatcgcccgctttatcaaggccaagcgcgatctcatcaagctgctcaccgag
cagaagctgcgcattatcgaccacgcggtgacgcgcgggcttgatgcatcggtggcgcta
aagccctccggcatcgaatggctgggggatgtgccggtgcattgcaggatagaacgcctt
aaatgggtttgtcgatttacatatggagattcactttcagacgctaatcgccgccaaggc
aatgttcccgtgtacggctccaacgggccggtaggtatgcacgatgtggccaatgtcgtg
ggcccttgcatagttatcggccggaaaggttcatttggaaaggtgaactactccgagagc
gacctgttcgcaatcgacacaacgtattttgtcgataaaaaatgcacgaaagctaatatc
cgatggctttattacgtattgatttggtgccggctagaccgaatctcaaaagattcggcg
gttcctggattggacagaaccgatgcgctgaacaccctcgtgccagtgccagatggggcg
gagcaagagcaaattgcaaaacagcttgatatcgagacagcagaggtaaatgacgccatc
accaaggtggaggaagaaatcaccctcatccgcgaataccgcgaccgcctgattaccgat
gtggtcaccggccaagtggacgtacgtggctggcagcccgacgtggaggatgtggtagaa
gacgcagtgctggccgcgctgggcgatgaccaggaagagatgaccgaacaggaggatgac
gatgacgaggactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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