KEGG   Xanthomonas hortorum pv. gardneri: BI317_01375
Entry
BI317_01375       CDS       T04668                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
xga  Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:xga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xga03400]
    BI317_01375
Enzymes [BR:xga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BI317_01375
DNA repair and recombination proteins [BR:xga03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BI317_01375
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_11
Other DBs
NCBI-ProteinID: APP83032
Position
316427..318403
AA seq 658 aa
MHGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKS
AKEMRERVAKRIRGDGAEGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKD
LMHGAKPDAIEDAKNLISRAKNAGMSPEQAMAAARSNREKEAASLYERYQARLTTFNAVD
FDDLIRLPVQILEGNEEIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGD
DDQSIYAWRGANPENLQQMGRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTL
WSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPLEKAL
QLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPEDDAAFLRAVQSPKREVGATSLARLA
ELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSASMPAGELVRTLAEK
SGLLNDLRNQSKDETGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSRNDKDDGGN
QVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNLQEERRLLYVGITRAKEQLWMS
HSKLTRKFGEHVRLKPSRFFDEIPAEELQRDGADPVADAERKKERASAGLAAIQALFD
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcacggtctcaatcccccgcaaagcgccgcagtgctgcactgcgaaggtcccttgttg
gtgctggccggtgccggcagcggcaagacgcgcgtgatcgtggaaaagatcgcgcatctg
atcgcaatcggccgttatccagcaaagcgcatcgctgcgatcaccttcaccaacaagtcg
gccaaggagatgcgcgagcgtgtggccaagcgcatccgtggcgacggcgccgaggggctg
accatctgcaccttccacgcgctggggctgaagttcctgcagatcgagcacgccgctgcc
ggtttgaagcgcggcttttcgatcttcgattccgacgatgccgccgcgcagatcaaggac
ctgatgcacggcgccaagcccgatgcgatcgaggacgccaagaatctgatctcgcgggcc
aagaacgccggcatgtcgcccgaacaggcgatggccgccgcacgcagcaaccgcgagaaa
gaagcggccagcctgtacgagcgctaccaggcgcggctgaccaccttcaacgcggtggac
ttcgacgatctgatccgcctgccggtgcaaattctggagggcaacgaagagatcgtgatg
ggctggcgcgagcgcatcggctacctgctggtggacgagtgccaggacaccaacgatgcg
caataccggctgctgaagatgctggccgggccgcgcggcaacttcacatgcgtgggcgac
gacgaccagagcatctatgcctggcgcggcgccaatccggagaacctgcagcagatgggg
cgcgattatccggccctggaaatcatcaagctggaacagaactaccgctgctccaaccgc
gtgctgcgggcggccaacgccttgatcgcgcacaacccgcatgagcacttgaagacgctg
tggagcgaccaggccgacggcgagcgcatccgcgtgtgggagtgtcgcgacagcgaacac
gaggccgaaaaggtcgccgccgagatctcgtttctgggcaccgccaagcaggtgccgtgg
agcgatttctgcatcctgttccgcggcaattttcaatcgcggccgctggaaaaggcgctg
cagttgctgcgcgtgccgtatcacctgactggtggcaccgcgtttttggagcggcaggag
gtgaaggacgtgttgtcgtggctgcgattgatcgtcaatcccgaagacgacgccgcgttc
ttgcgcgcggtgcagtcgcccaagcgcgaagtcggtgcgacctcgctggcgcgattggcc
gagcttgccagtgccaagtcggtgccgatgtcgcgcgctgccgaatcgatgggcgcgctg
cagcacttgccgccgcgtgcggccaatggcctgagtgcgttcaccgatatcctgcgcgat
atgcgcgagcattcggcctcaatgccggccggcgaattggtgcgcaccttggccgaaaaa
tccggcctgctcaacgacctgcgcaaccagtccaaggacgaaaccggctttcagcgccgc
aagcgcaatctggacgaactggccgagtggttcgaaggcggcccacgtggggcaagcgcc
agcgatctggccgcgcagctggcactgttgtcgcgcaacgacaaggacgatggcggcaac
caggtgcgcatgatgaccatgcacgcgtccaagggtctggagtttcgctatgtcttcatc
gtcggctgcgaagacggcgtgctgccgcatgaagtgagcctggaagaaggcaatctgcag
gaagaacgccgcttgttgtatgtgggcatcacccgcgccaaggagcagctgtggatgagc
cacagcaaattgacgcgcaagttcggcgagcatgtgcggctcaagccgagccggttcttc
gacgagattccagccgaagaactgcagcgcgacggcgccgacccggtggccgatgccgag
cgcaagaaagagcgtgccagcgcgggcctggcggcgatccaggcgttgttcgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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