KEGG   Xanthomonas hortorum pv. gardneri: BI317_03420
Entry
BI317_03420       CDS       T04668                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
xga  Xanthomonas hortorum pv. gardneri
Pathway
xga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BI317_03420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xga03400]
    BI317_03420
Enzymes [BR:xga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BI317_03420
DNA repair and recombination proteins [BR:xga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BI317_03420
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 SH3_16 AAA_19
Other DBs
NCBI-ProteinID: APP83360
Position
complement(777505..779727)
AA seq 740 aa
MSSTVATLRVALPVPLPQLFDYLPPADAPLTDPARLGCRVRVPFGPRELVGVVVEIGQLA
SAEGLRPALAWCDDAPLLVDELARSLHWLARYTHAPLGEAQASALPGPLRRGEPLADTHA
WAWQLTEAGRTGAASLRTGSRPALLAALLLTGAVGEEQLDPLLPQWREAARSLAKRDYAE
RVAVPADAIPPRPGSGPQLNDEQQAAAAAVRAHTGFATYLLDGVTGSGKTEVYLQAIADC
LAAGRQALVLVPEIGLTPQTLGRFRARLGVPVHALHSGLSDGERARVWAAAWRGEAKLIV
GTRSAIFIPLPKAGLIVVDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSATPSL
ESLHNAYSGRYQHLRLSRRAGEARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARGEQV
LVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQSAPLAC
PACASLALQPQGIGTERLEERLTEAFPEFPVVRIDRSTTQRRDALETQLARLGTEAGILV
GTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLSQQLIQVAGRAGRADRPGEVWLQ
THHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVAAANQFLMAVR
GLTTSDSSAESPAFAAVECYGPMPAPMPRRAGFQRTQLLLSAQQRSALHRLLDAQLPAIY
ALPQARRVRWSLDVDPIDLY
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgtcttcgaccgtcgccaccctgcgcgtcgccttgccggtgccgctgccccaactgttc
gactatctgcccccggccgatgccccgttgaccgatccggcgcggctcggctgccgggtg
cgggtgccgttcgggccgcgcgagctggtcggcgtggtggtggaaatcgggcagttagcc
tcggccgaagggctacgcccggccttggcctggtgtgacgatgccccgctgctggtcgac
gagctggcccgctcgctgcactggttggcgcgctacacccacgccccgcttggcgaagcc
caggccagcgccctgcccggcccgctgcgccgcggcgagccgctggccgacacccacgcc
tgggcctggcagctgaccgaagccgggcgcactggcgccgccagcctgcgcacgggtagc
cggcccgccttgctcgccgccctgctgctcaccggtgcggtgggcgaagaacagctggac
ccattgctgccgcaatggcgcgaggccgcgcgcagcctggccaagcgcgactatgccgag
cgcgtggcggtacccgccgacgccatcccgccacgccccggcagcggcccgcagctcaac
gacgaacaacaggctgccgccgccgccgttcgcgcgcataccggctttgccacctatctg
ctcgacggcgtcaccggcagcggcaagaccgaggtctacctgcaggcgatcgccgattgc
ctggccgcaggccgccaggcgctggtgcttgtgccggaaatcggcctgacaccgcagacc
ttgggccgcttccgcgctcgcctgggtgtaccggtgcacgcgctgcactcgggtctgtcc
gatggcgaacgcgcacgcgtctgggcggccgcctggcgtggcgaggccaagctgatcgtc
ggcacccgctcggcgatcttcattccgctgcccaaggccggactgatcgtggtcgatgag
gaacacgacggcagctacaagcagcaggacggcatccgctatcacgcccgcgacttcgcg
ctggtgcgcggcaaggcgctggatgtgccggtgattctgggcagcgccacgccctcgctg
gaaagcctgcataacgcctattccggccgctaccagcatctgcgcctgtcgcgccgcgcc
ggcgaagcgcgtccgccgcgcgtgcgcgtgctcgatgtgcgcaaacgcccgctcaaggac
gggctgtcgccagaggtgctggccggcatcggcgccaccctggcgcgtggcgagcaggtg
ctggtgttcaagaaccgccgtggctatgcgccggtgctgctgtgccacgactgcggctgg
accgccgcctgccagcgctgcagcacgccactgcatcagaccccgatgaccgtgcacgcc
ggtgggcgccgtctgcaatgccaccactgcggcgcgcgccaatccgcaccgctggcctgc
cccgcctgcgccagcctggcgctgcagccgcaaggcatcggcaccgagcggctggaagaa
cgcctgaccgaggcgtttccggagtttccggtggtgcgtatcgaccgcagcaccacccag
cgccgcgatgcgctggaaacccaactcgcccggctcggcaccgaagccggcatcctggtc
ggcacgcagatcctggccaagggccacgacctgccgcggctgaccatggtggtggtggtc
ggcatcgacgaaggcctgttctccgccgacttccgtgccgccgagaaactctcccagcaa
ctgatccaggtcgcaggacgcgccgggcgcgcagaccgccccggcgaggtctggctgcag
acccatcaccccgaacatccgctgctgcagaccctggtcaacggcggttatcacgccttt
gccgatgccgaactgcagcagcgcgaagctgcgggatttccacctttcgcgcatctggcg
ctgttccgcgcagaggccaaggatgtggcggccgccaatcagtttttgatggcagtgcgt
ggcttgaccacgtcggacagcagcgccgaatcgcccgcgtttgccgcagtggaatgctac
ggcccgatgcctgcaccgatgccgcgccgtgccggtttccaacgcacgcagttgttgttg
tctgcgcaacagcgctcggccctgcatcgtttgctcgatgcgcaattgccggccatctat
gcgctgccgcaggcacggcgcgtgcgctggtcgctggatgtggacccgatcgatctgtat
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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