KEGG   Xanthomonas hortorum pv. gardneri: BI317_06480
Entry
BI317_06480       CDS       T04668                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
xga  Xanthomonas hortorum pv. gardneri
Pathway
xga03030  DNA replication
xga03430  Mismatch repair
xga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BI317_06480
   03430 Mismatch repair
    BI317_06480
   03440 Homologous recombination
    BI317_06480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xga03032]
    BI317_06480
   03400 DNA repair and recombination proteins [BR:xga03400]
    BI317_06480
Enzymes [BR:xga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BI317_06480
DNA replication proteins [BR:xga03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BI317_06480
DNA repair and recombination proteins [BR:xga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BI317_06480
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_16 AAA_14 AAA_5 ResIII PIF1 AAA_18 AAA_7 AAA_19 Mg_chelatase nSTAND3 TsaE AAA_24 AAA_2 DNA_pol3_delta SKI Acetyltransf_6
Other DBs
NCBI-ProteinID: APP83886
Position
1388940..1391009
AA seq 689 aa
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLLQVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPS
VAFVGDGIDPTAYAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGADDGRGAGAGSGAHSAAAGGQIAAPVAAVPAAVAKQAAAKHAEVIEAMPAAVAA
DVTRPAPTAPAVAVVATAPAPVVVLTAPAASSDASPSAPPARNDDTPPWAMDDAPVRAKS
APVSASPAVSAPEAAMAASAAVVAAQPVAVAPEAAVAPPVAAVAPALAADAAPAVATPSV
TAVSAASPTSDPSVLLDDGQIADAEQWLELVTRSGLNGPSRQLAANAAFVSHRDGVLRLA
LAPGFEYLNSERSIANLAQALAPELGNTPRIVIETGSADVDTLHERANRQKGERQSAAET
AFMNDPNVQQLIQQQGARVVPDSIRPYDE
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgtcttatcttgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgttggc
caggaacatgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcaccacgcg
tttctgttcaccggcacccgcggcgtgggcaagaccaccatcgcgcgcatcttcgccaag
tcgctcaattgcgagaccggcaccagtgccgatccgtgtggcacgtgcccggcctgtctg
gatatcgatgccggccgctatatcgacctgctggaaatcgacgccgcctccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccgtcgcgcggcaagttc
aaggtctatctgatcgacgaagtgcacatgctctccaaagcggcgttcaacgcgctgctc
aaaaccctggaagagccgcccgaacacgtgaagtttctgctggccaccaccgacccgcag
aagttgccggtgacggtgctctcgcgctgcctgcagttcaacctcaagcggctggacgaa
gatcagatccagggccagatgacccggatcctggccgccgagcagatcgaatcggatccg
tcggcgatcgtgcagctgtccaaggccgccgatggctcgttgcgcgatggcttgtcgctg
ctcgaccaggccatcgcctatgccggcggcgcgttgcgcgaggacgtggtgcgcaccatg
ctcggcacggtcgaccgcacccaggttggcgcgatgctgcagtcgctggccgatggcgat
ggcgcgcgcctgttgcaggtggtcgccgcgctggccgaattctcgcccgactggagcggt
gtgctggaggccttggccgaggctttgcaccgcatccaggtgcagcagctggtgccgtcg
gtggcatttgtcggcgatggcatcgacccgaccgcgtatgccgcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgcgatctgtatctggcgccg
agcccgcgcgccggtttcgagatggcggtgctgcgcatgctcgctttccgtcctgcagcg
gcggtgccggctggtggcgctgacgacggacgcggtgctggcgccggtagcggtgcgcat
tcggcagcagctggcggtcagattgctgcaccggtcgcggcggtgcctgctgcagtcgcg
aagcaggcagcggccaagcatgccgaggtgattgaagcgatgccggctgccgttgcggcg
gacgtgacgcgtccggcgcccacggctcccgcagtcgcagtggtcgctacagcgcctgca
ccggttgtcgtcctgactgctccggcggcctcttccgatgcttcgccgtcagcccccccc
gcgcgcaacgacgacacgccgccctgggcgatggacgatgcgcccgtgcgtgcgaaatct
gcgcccgtctccgcgtcgcccgctgtgtccgcgccggaagctgcaatggcagcttctgca
gcagttgtggctgcacaacctgtcgcggttgcgcccgaagcggcagttgcgcctccggtg
gctgctgtggcaccggcgctcgccgcggatgcagcgccggctgtggcgacaccctcagtg
actgccgtatccgcagcatcgccaacatccgatccatcggtcctgctcgacgacggccag
attgccgacgccgagcaatggctggagctggtcacccgcagcggcttgaacggcccttcg
cgccagcttgcggccaatgctgccttcgtcagtcatcgcgatggcgtgctgcgtctggcg
ctggcgccgggctttgaatatctgaactccgaacgttctatcgccaaccttgcgcaagcg
ctcgcgcccgagttgggaaacaccccgcgcatcgtcatcgaaaccggcagtgccgatgtc
gataccctgcacgagcgggccaaccgccagaaaggcgagcgccagagcgcggccgaaacc
gccttcatgaacgacccgaatgtgcagcagctgattcagcagcagggcgcgcgggtcgtc
cccgattccatccgcccttacgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

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