KEGG   Xenopus laevis (African clawed frog): 108697619
Entry
108697619         CDS       T01010                                 
Name
(RefSeq) agrin isoform X4
  KO
K06254  agrin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04512  ECM-receptor interaction
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108697619
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108697619
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:xla00535]
    108697619
Proteoglycans [BR:xla00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   108697619
SSDB
Motif
Pfam: Laminin_G_1 Kazal_2 Laminin_G_2 Kazal_1 NtA Laminin_EGF EGF CFAI_KAZAL SEA Laminin_G_3 hEGF
Other DBs
NCBI-GeneID: 108697619
NCBI-ProteinID: XP_018083315
UniProt: A0A8J0TG28
Position
7S:complement(76721540..76992971)
AA seq 2079 aa
MGRRWGAPAALLWTFWVVTTVGLGLSRSSCPERKLELREEEANVVLTGTVEEIMNVDPVH
HTYSCKVRVWRYLKGRETVTNDILLDGGNKVMVGGFGDNTICDNQVSTGDTRIFFVNPAP
RSMWPTHRNELMLNSSLMRITLRNLEEVEMCVEDKPGHVPIAQPTLQDVCRGMLCGFGAV
CEKSSTDPSQAACICKKTACPSIVAPVCGSDYSTYSNECELERAQCNQQRRIKVISKGPC
GTKDPCSTVSCSYGSTCVRSTDGQTAKCICPATCIGVPENVVCGSDGKDYNNECLLNKQA
CDNQENLYKKFDGPCDPCRITLNNLNKACRVNPRSRQLDLQYRPEYCPVRRDPICADDGV
TYDNDCVMTRSGFIRGIDLQKVHSGQCQPQDKCKEDCKHNSVCLNHRVVSRCSCDRVTCD
GTYKPVCGGDSRTYANDCERQKAECFQKTSIPVKHKGPCDLHSPSPCLNTTCSFGAACVV
KNKKAVCECQQVCQAVYDPVCGSDKRTYGNPCELQSTACTLKKEITILHKGPCDRCGKCQ
FGAICEAETGRCVCPTECVPSAQPVCGTDGNTYESECELHVRACTQQINLQVAAQGDCKT
CGNTLCIFGAKCVNNQCVCPSCERQPYLPVCGSNGVTYDNQCEVKAASCKQMKWIEVSRA
GSCDDECGSGTDGSGSGEDSECEQDRCRRYGGSWDEDAEDDRCVCDFTCHAVLRNMVCGS
DGITYSNECELKKTRCERRQDLYVAGQGPCRAATTTSSPPLVPHCSHTVYGCCPDNITAA
LGVGLAGCPSSCQCHQYGSYGGTCDPTTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDKK
SGCTPCNCDPVGAVRDDCEQMTGLCSCKTGISGLKCSQCPDGRKPGLTGCEKDPSAPRSC
DAIKCQFGATCVIIGGFAHCECPSPLCAEANLTKVCGSDGVTYGDWCQLKTIACRQGRTI
TVKHTGPCQETVTHANLQTLSPTGTPSPPVVRTLPTPVNTKIAKAKKKTDSFQLVLEATS
LSPLSSSTMRPVTQTNKAYTSTIRPAVTIPTVHPTIYQSYDESGSGSGDEELETSGDQDL
SGVEPKEPFDVENEQQEEAEEKRDFVTTTVIERASCYNTPLGCCSDGKTPANDAEGTNCP
KTKIFQGVLIIEELEGQEVFYTPEMSDYKSELFGETARSIENALDNLLRDSDVKRDFKSI
RVRDLGPSNSIRTIVEAHFDPATTMSAMDVQRALLRQLKSSKNKAISIKKPIQDNVKFLD
FGEIPDWVPLMVTTTTITAATTGMVATTATATTTTPVVSTARTVATTPPPRRIVAVKTTL
EPVVQQTTPRMTTRRPVTTKRPMTTIPATTRRKPPRIPTKKPPRPCESHPCLHGGTCEDN
GKDFTCSCPAGRGGAVCEKSIKYFIPGFGGKSYLAFKMMKAYHTVRIAMEFRSSEQNGLL
LYNGQSLGKDFISLAVINGFVELRFNTGSGTGKITSKVPIEPGKWHQLVVTRNRRSGMLS
VDGESHVNGESPTGTDGLNLDTDLFIGGAPEDQMSVVSERTSVSVGLKGCIRQLDVNNQL
YNLQEGGADVLYGSGVGECGNNPCQPNPCHNGAVCQVKEAEMFHCQCFSGYTGPTCADER
NPCDPNPCHASATCLVLPEGGAKCECPMGREGEFCEKVSNQDLNLPFLPQFNGYSYLELK
GLQAFATDLQDKLAMEVVFLASSPNGLIFYNGQKTDGKGDFVSLSLHDGNLEYRYDLGKG
AAVIKSKEKIPLNTWVSVSIERSGRKGLMRINNMEQVTGESPKSRKAPHTALNLKEPLYV
GGAPDFNKLARAAAASSSFVGAIQKISIKGLPVLREENIRSAIEISAFHGHPCTQKPFPC
QNGGLCSPNKGDYECVCQRGFSGGQCEKVTIEKAAGESEAVSFDGKTYLEYHIAVTKSEK
ALLVNQFELSIKTEATQGLILWSGKGTERAYYISLAVVGGYVQMTYDLGSKPVVLQSTVR
VNTNEWIRIKAVRNNRDGFLHVGNEAPVHGSSPLGVKELETDGALWLGGIEKLSMSYKLP
KAYSTGFIGCMKDVLVDQQELHLEEDALNKPPILYCAAK
NT seq 6240 nt   +upstreamnt  +downstreamnt
atgggaagaaggtggggagccccggccgcgcttctttggactttctgggttgtaacgacg
gtgggtctggggttgagcaggagctcatgtcccgagagaaagctggagctaagggaagag
gaggcgaacgttgtgctcaccgggactgtggaggagatcatgaacgtggacccggtgcat
cacacctactcttgcaaggttagagtatggcgatatctgaagggccgggagactgtgaca
aatgatattctgctggatggaggtaacaaagtgatggttggaggatttggagacaacaca
atctgtgacaatcaggtgtccacaggcgacacaaggattttctttgttaatcccgccccc
cgatctatgtggcccactcatcgtaatgagctgatgctaaactccagcctaatgaggata
acccttaggaacttggaagaggtagaaatgtgtgttgaagataagcctggccatgtccct
attgctcagccaactctacaggatgtgtgccgaggaatgctctgtggatttggcgcagta
tgtgaaaagagcagcacggacccctctcaagcagcgtgcatctgcaagaaaaccgcctgc
ccctccattgtcgcccctgtgtgtggttccgactattctacttacagcaacgagtgtgaa
ctggagagagcccagtgcaaccagcagaggagaatcaaagtcatcagcaaggggccatgc
ggtaccaaggacccatgctcaacagtgtcttgtagctatggcagtacctgtgtccgctca
acagatggccagacagcaaagtgtatttgtcctgccacctgcataggggtcccagaaaat
gttgtttgcggcagtgatggcaaagactacaacaatgagtgtcttcttaacaaacaggct
tgcgacaatcaggaaaatctttacaagaagttcgatgggccttgcgatccatgcagaatc
accttgaataatctcaacaaagcatgtcgagtaaacccacgcagtcggcaactggacttg
caataccggccagagtactgcccagtgcgcagagatcccatttgtgcagatgatggtgtg
acttacgacaatgattgtgtaatgacccgatctggattcatccgtggcattgatctacag
aaggtgcactcgggccagtgccagcctcaagacaaatgcaaggaagactgtaagcacaat
tctgtatgccttaaccaccgagttgtgtcccgttgttcttgcgatcgtgttacttgcgat
ggtacttacaaaccagtctgcgggggggacagtcgcacatacgccaatgactgcgagaga
caaaaggcagagtgctttcagaaaacttccatcccagtaaaacacaaaggcccttgtgat
ctccattcccccagcccgtgcctgaacacaacatgcagttttggagcagcatgtgtagta
aaaaacaagaaggcagtatgcgaatgccagcaggtgtgccaggcagtgtatgacccagtg
tgtggcagtgataagcgcacttacggcaacccatgtgagctgcagtcaacagcctgcaca
cttaaaaaagaaataaccattttacacaaagggccttgcgaccgctgtgggaaatgccag
tttggagccatctgtgaagcagagacaggccgttgtgtatgtccaacagaatgtgtgcct
tcggcgcagcccgtgtgtggcactgatggaaatacatatgagagcgaatgtgagctccat
gtacgagcatgcactcagcagattaatctacaggtagcagcgcaaggagactgcaaaacc
tgtggcaatactctttgtatctttggggcaaaatgtgtgaacaaccagtgcgtgtgccca
tcttgcgaacgacaaccctaccttcctgtgtgtggcagcaatggcgtcacctatgataac
caatgtgaagtgaaagctgcatcgtgtaagcagatgaaatggattgaagtatctcgagca
ggatcttgtgacgatgaatgtggctctggcactgatggttctggttccggggaggacagt
gagtgtgagcaagatcgatgcagacgctatggaggctcatgggatgaagatgcagaggac
gatcgctgtgtctgtgactttacctgtcatgctgtgctgcgaaacatggtctgtggatcg
gatggcattacatactctaatgagtgtgagctaaagaaaactcgatgtgagagacgtcag
gacctgtatgtggctggacagggtccctgtcgagctgccaccaccaccagctctcctcct
ttggtgccacactgtagtcacaccgtatatggctgctgtcctgacaatatcacggctgcc
cttggtgttggcctggccggatgcccaagcagctgtcagtgtcaccagtatggctcttat
ggaggaacctgtgatcccaccactggtcagtgttcttgtaaacctggtgtaggaggactg
aagtgcgaccgatgtgagcccgggttctggaacttccgcggcattgttactgataagaag
agcggctgcactccatgtaactgtgacccagtcggtgccgttcgagatgactgtgaacag
atgacaggactttgttcttgcaaaactggaatctccggtctaaagtgcagccagtgccct
gatggacgcaagcctggccttacaggctgtgagaaagatccttcggctcctagatcttgt
gatgccatcaaatgccagtttggtgcaacttgtgtgataattggaggatttgctcactgt
gagtgcccatctcccctgtgcgctgaggctaatttgacaaaggtctgtggttctgatggc
gtgacttacggagactggtgccagttgaaaaccattgcctgccgtcagggccgtactatc
acagttaaacacactggaccgtgccaagaaactgttactcatgccaaccttcagacacta
agtccgacaggaacaccctctcctcccgttgttcggactctaccaactccagtaaacaca
aagatagcaaaggccaagaaaaagacagattccttccagctagtcttagaagccacatca
cttagtccactttctagcagcactatgagaccagttactcaaacgaataaagcttatact
tctaccattaggccagctgtcaccattcccacagtccaccctactatatatcagagttat
gatgaatcaggaagtggcagtggggatgaggagctagaaactagcggtgatcaagattta
agcggcgttgaacccaaagagccatttgatgtggagaatgaacagcaggaagaagctgaa
gagaagagagactttgtaaccaccacagtcatagaaagagccagctgctacaacacacct
ctaggatgctgctccgatggaaagaccccagctaatgatgcagaaggaacaaattgccca
aaaacaaaaatttttcaaggtgtccttattattgaagagttggagggacaagaggtgttc
tacacaccagagatgtcagattacaagtctgagctttttggagaaactgccagaagcatt
gagaatgctctggacaatctacttcgtgattcagacgtcaagagggatttcaagagcatc
cgtgtgagggaccttggaccaagcaattccatcaggaccattgtggaagcacattttgat
ccagctaccacaatgtctgccatggatgtgcagagagcattgctgcgacagctcaagagc
tccaagaataaagcaatatctataaagaagcccattcaggataatgtcaagtttctggat
tttggtgagatccctgactgggtgcctcttatggttacaacaacaactataacagcagca
accactggtatggtagctacgacggcaactgccactaccacaacacctgtagtcagtacc
gcaagaaccgtggcaacaactccaccacccagaagaatagttgcagtcaagaccacccta
gagccagttgttcagcaaactactccaagaatgacaacaaggcgaccagtgactacaaaa
agaccaatgaccactattcctgccaccaccaggagaaaaccaccacgtattccaaccaag
aagcctccacggccatgcgaatcacacccttgtctacatggaggtacctgtgaggacaat
gggaaagatttcacatgtagctgcccagctggcagaggaggagctgtgtgcgagaaaagt
attaaatattttattcctggttttgggggcaagtcatacctggcattcaagatgatgaag
gcatatcatacagtgcgcattgccatggagttcagatcctctgagcagaacggacttctc
ctatataatggtcagtcactcggaaaggacttcatctctcttgcagttattaatggcttt
gtagaactcaggtttaatactggatctggaactggaaaaataaccagtaaagtgcccatt
gaacccggcaagtggcatcaattagtagtgacccgtaacaggcgcagtggcatgttgtct
gtagatggtgaatctcatgtcaatggcgaaagcccgactggaactgatggcctcaaccta
gacacggatctctttataggaggagctcctgaggatcagatgtctgtggtatcagaaagg
acctctgtgtctgttggtcttaaaggctgcatccgtcaactagatgtgaacaaccaacta
tacaacctacaagaaggtggagctgatgtcttatatggaagtggggtgggagagtgtggt
aacaacccctgccaacctaacccatgtcacaatggtgctgtatgccaagtgaaggaggca
gaaatgttccactgccagtgtttcagtggttatacagggcccacctgtgcagatgagcgc
aacccatgtgacccgaacccctgccatgcttctgctacctgtctagttttacctgagggt
ggtgccaaatgtgaatgcccaatgggcagagagggagagttctgtgagaaagttagcaac
caggatctgaatttgcctttcttacctcagtttaatggatactcttacttggaactgaag
ggactgcaggcatttgccactgacctacaggacaagcttgccatggaagtagtgttccta
gccagcagccccaatggtctcatcttctataatgggcagaaaactgatggaaagggagat
tttgtgtcattgtcccttcacgatggcaatctagaataccgttatgatctcggaaaggga
gctgctgtgatcaagagcaaagaaaagattcccctgaacacatgggtcagcgtctccatt
gagcgaagcggcaggaagggattgatgcggatcaataacatggaacaagtcactggggaa
tcaccgaaatcccgtaaggcaccccatactgctctcaatctgaaagagcctctatatgtg
ggcggagctccagatttcaacaaattagccagggcggctgctgcctcatcaagctttgta
ggagccattcagaagatttccattaagggactgcctgttctgagagaagaaaacatccgc
agtgctattgagatctctgctttccacggccatccttgtacccagaaacccttcccttgc
cagaatggggggctttgttctcctaataaaggagactatgaatgtgtttgccagaggggt
ttctcaggtggtcagtgtgagaaagtgaccattgagaaagcagcaggagaatctgaggca
gtatcatttgatggcaagacttacttggaatatcatattgctgtaaccaaaagtgagaag
gcgctgctggtcaaccaatttgagctgagtatcaagaccgaagccactcagggtctcatc
ctttggagtggaaaagggacagaacgtgcctattatatttccttggctgtggttggaggg
tatgtccagatgacttatgatctgggctccaaacctgttgtcctgcaatccacagtacgc
gtgaacaccaatgagtggatccgcattaaagctgtacgaaacaaccgagatggctttttg
catgttggcaatgaggcccctgtccatggatcctctcctcttggagtcaaagaactggag
actgatggagccctgtggctgggtggaatagagaagctgagtatgtcgtacaagctgccc
aaagcttacagcacgggtttcattggctgcatgaaggacgttctagtggaccaacaagag
ctgcacttagaggaagatgcattgaataaaccgcccatattatactgcgcagccaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (91)   
   KEGG ORTHOLOGY (1)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (11)   
   Pfam (11)   
All databases (118)   

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