KEGG   Xenopus laevis (African clawed frog): 108703222
Entry
108703222         CDS       T01010                                 
Symbol
sox8.S
Name
(RefSeq) transcription factor Sox-8-like
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    108703222 (sox8.S)
Transcription factors [BR:xla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    108703222 (sox8.S)
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2
Other DBs
NCBI-GeneID: 108703222
NCBI-ProteinID: XP_018094788
Xenbase: XB-GENE-17340336
UniProt: A0A1L8ER49 A0A974BVE9
Position
9_10S:complement(104714103..104725232)
AA seq 461 aa
MLNMSSDQEPPCSPSGTASSMSHVSDSDSDSPLSPAGSEGRGSHRPPGISPLSGDGKEAM
DERFPACIREAVSQVLKGYDWSLVPMPVRGSGGLKSKPHVKRPMNAFMVWAQAARRKLAD
QYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAG
QSDSDSGAELGHHPGSQMYKSESGMGSMGENHLHSEHAGQNHGPPTPPTTPKTDLHHGGK
QELKHEGRRMMDNGRQNIDFSNVDIGELSSEVINNIEAFDVHEFDQYLPLNGHGAIPADH
GQNTTTAPYGPSYTHAPGATPAPVWSHKSSSTSSSSSSESGQQRPHIKTEQLSPSHYNDQ
SQGSPTHSDYNTYSAQACATTVPTATVPTSFPSSQCDYTDLPSSNYYNPYSGYPSSLYQY
PYFHSSRRPYATPILNSLSIPSSHSPTSNWDQPVYTTLTRP
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgctgaacatgagttcggaccaggagcccccgtgtagccccagcggcactgccagctcc
atgtctcacgtttcggactctgactcggattccccgctgtctccagccggctcagagggt
cgcggctcccaccgacccccgggcatctccccgctttctggagacggtaaagaagccatg
gatgagcgctttccagcttgtattcgggaggcagtgtcccaggtgctgaaaggctacgac
tggagcttggtgcctatgccagtccggggatccgggggcctcaagtccaaacctcatgtc
aagagaccaatgaacgcctttatggtttgggcacaggcagccaggaggaaactggcagat
caatacccgcatttacacaatgctgagctcagcaagaccctggggaagctgtggcgttta
ctgagtgaaagtgaaaaacgtccctttgtggaggaggctgagagactgagagtacaacac
aaaaaagatcatcccgattacaagtaccagccacgtcgaaggaagagcgcaaaggcagga
caaagtgactcggactccggagcagaactgggtcatcaccctggctcccagatgtacaag
agtgaatcaggaatggggagcatgggagaaaatcatctacattccgagcatgcaggtcaa
aaccatggacctccaactcctccaaccacccccaagactgatctgcatcatggtggcaag
caagagttgaagcatgaaggcagaaggatgatggacaatgggaggcaaaacatcgatttt
agcaatgtggatatcggtgaactgagcagtgaagtcatcaacaatatagaagcctttgat
gtgcatgaatttgaccagtatcttccccttaatggccatggggccatacctgctgaccat
gggcagaatacaacaacggcaccttatgggccctcatatactcacgcgcctggagccaca
ccagctcctgtttggtcacacaagagctcctctacttcctcttcttcttccagtgagtct
ggtcaacaaaggccccacatcaagacagagcagctgagccccagccattataatgaccag
tctcaggggtcacctacccattctgactataatacctacagtgcccaggcatgtgccacc
actgtgcctactgctacagtgcccacctcttttccaagctcccaatgtgactacacagac
cttccaagctctaattattacaacccatactctggttatccatccagtctctatcaatat
ccctacttccattcatcccggcggccttatgctacacccatcctcaatagcttgtccatc
ccatcctctcacagccccacctccaactgggaccagcctgtctacacaaccctgacaagg
ccataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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