KEGG   Xenopus laevis (African clawed frog): 108710817
Entry
108710817         CDS       T01010                                 
Name
(RefSeq) gem-associated protein 5-like isoform X1
  KO
K13133  gem associated protein 5
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108710817
   03041 Spliceosome [BR:xla03041]
    108710817
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     108710817
   mRNA cycle factors
    P-body specific factors
     108710817
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    108710817
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160
Other DBs
NCBI-GeneID: 108710817
NCBI-ProteinID: XP_041441986
UniProt: A0A8J1MKQ4
Position
3L:26628602..26683972
AA seq 1494 aa
MTVVVVKGLLKEPRVDRYLLCDRMGEQDRMLSASPNWYCSRSSDAAGGLFGFAARNSIYL
LHINPQEPGFYGELVGHTDRVSGFAFSHFSGQSHLCASSSDDGTVKVWDTQTKNTVTEHQ
LHRNTISALHWSPLVKDLLISGDEKGVLVCFWCNRNDSQQFFPEPRTIFCLSCSPHKEDI
VAIGYKDGMIVLVDISRRGDVVHRLRGHDEEIQCLVWNPHAQECDLQQKPEETDTNTANG
ELLPEMENKKCYMASGSKDQTIRIWSTSTGKAVTVLKLPYLKRRGGGVDPAIKERLWLTL
HWPPGHPTQILSSCFGGELILWDLAKSGKQKWTLLGTSDGQNHSRIVFNLCSMVTEEGKE
LLLSTSMDRDVKCWDLGSLSCCWSLTSLGGFVYSLAFSPVAAGSLAVGVGDSMIRVWNTM
SVVNAYDVKTLWQGIRSKVTALSWHPTKEGSLAFGTEDGKVGIFEVYVSKPPQISSTYHK
KTVYSLSWGPPLPPFSFGAEGDHPSYTLYSCGGEGVIYQHNPWKLTDEASNINKLILDTN
DIKHKLPAHTELNWRPDGQYLAIGNEDGTIEVFRMPCLQLMCTIQQHHKLVNAVRWHHGH
SQDPDLSFLLASGSNNATIYVHNLKGPLENPSDSPITITEPFRTLLGHTAKITSLSWSSH
HDARLVSASYDGTAQVWDVLQEEPLSNYRGHKGRLLSVQWSPVDPDQVWTGADDFCLHNW
SISKQEHSRPPKGKKAIDFEKKRGLQSKPKAKKKKKLDTPKEETGGELLKGEEESPLTQN
GTSDQEHGTPEPVATDKDLHEADVERSSQLVTSPVPAPDKHSPISFSKAGPIRKDQAKER
ADLQRKKKSRSLLPISTSKDHRSKEEQHRDCVKLATALCAKDLKERSDSHSEDATHLGLY
SDRASLYRLMEEEGQAHLENGHPELQHQIMLWKGDLKGTLQLAAERGELTDQLVALSPMA
GYNVWLWVVEAFVKQLCFQEQYVKAASHLLSINKVYEAVELLKGNHLYREAIAVAKARLL
PDDPVLRQLYTGWAAVLEQDGHYSMAAKCYLGSSSPYDAAKVLAKKGDLLSLSTAAELAL
VAGEKDLAASFAIRCAQELVTAKNFVAAQEALRQHHSLLGQRLLFCTSELLYTHLEEKMP
VDWKTQSSPCFHEQTGNSNGESFMAKLSRLWKSVCGVNSPGQYTDALQQLSASEIPQTTV
NTGPKQLLLHLSHEITILSLNCQLNNWEEAAPSLLRVLFRCHQAGHFTLMQGIARLLLPN
GCEELRAMLPPENKESLTACDSVEAFLAYIKMYEMWWGQQEMQTNSKEPAAEVNMDSPNG
DPDAMQEAEQDIKPRDICGFEVLLSDHHAPFQSAQREISEVQRALREMIQQHQKIRQNED
SSLELEPEPELNTSPSQDKTPDSQANVSACPSPVSLTELMKRLSTANHKLAEFPDYLKAL
PFPDVLESCLVLLHLPSYQISPDMRSRALALLHSYVPGSSDHKKAAKKFLSFPE
NT seq 4485 nt   +upstreamnt  +downstreamnt
atgacggtagttgtagttaagggattgttgaaagagcctcgggtggacagatacttgctg
tgtgataggatgggggaacaggatcgaatgctcagtgcgtcacccaactggtactgtagc
cgctccagtgatgctgccggaggcctgtttggatttgctgctcgaaattctatctacctc
ctgcacattaacccacaggagcctggattttatggagagctggttggacatacagaccgt
gtctctggctttgctttctcccacttctcaggccaatctcatctgtgtgccagtagctca
gatgatggtactgtaaaggtttgggacacacagactaagaacactgtgacggagcaccag
ctccatcggaacacaatctctgccctgcactggtcgcctttggtgaaggatctgctgata
tctggggatgaaaaaggagtattggtttgtttttggtgtaaccggaatgacagccagcag
ttttttcctgagccaaggaccatcttctgcctttcctgctctccgcacaaggaggacatt
gtagctatagggtacaaggatggcatgatagtcctggtggatatcagccgcagaggagat
gtggtgcatcggctacgagggcatgatgaggagatacagtgtttggtgtggaacccccac
gcccaggagtgtgacctgcaacaaaagccagaggagacagatacaaacacagccaacggg
gagctccttcctgagatggagaacaagaaatgttatatggcttctggcagcaaagatcaa
actatccgtatttggagtacctctacaggaaaagcagttacagtgttgaagttgccgtac
cttaagcgccgtggaggtggggtagatccagccattaaggagcgtctctggttaacactg
cactggccacctggccatccaacacagatactgtccagttgtttcggcggtgaactgatc
ctgtgggatttagccaaatccgggaagcagaaatggactcttctgggcacgtctgatgga
cagaaccattcccgtattgtctttaacctttgttctatggtcactgaggaagggaaggag
ctcttactgtctacttccatggaccgagatgtgaaatgttgggatctgggctccctgtcc
tgctgttggtccttaacgtccctcggtggctttgtatacagtctggctttctccccagta
gcagctggtagcctggctgttggggtgggagacagcatgatccgcgtgtggaatacaatg
tctgtcgtcaatgcatatgatgtgaagactctgtggcagggaatcagatccaaggtcact
gcgctgtcatggcatcccaccaaagagggcagccttgcttttggcacagaggatgggaaa
gttggtatctttgaggtctacgtcagcaaaccccctcagatttccagtacctaccacaag
aagactgtttattccttgtcctggggacctccgctgcctccattttcatttggcgcagaa
ggggaccatccttcatatacactgtacagctgtggtggggaaggggttatttaccagcac
aacccttggaaactgacagatgaagccagtaatattaacaagctgatcctggacaccaat
gacatcaaacacaagttaccggcacacacagagttaaactggagacctgatggacagtat
ttagctattggcaatgaagatggaaccattgaggtcttccgcatgccatgtctgcagctc
atgtgtaccattcaacagcatcacaagctagtgaatgccgtgcggtggcatcacggtcat
agccaagaccccgatttgagcttcctactggcatctggatctaacaatgctaccatctat
gtgcacaatctgaaggggcccctcgagaatccctcagattccccaatcaccatcactgag
cctttccgtacccttcttgggcacactgcaaagatcacaagcctgtcatggagctctcac
cacgatgccagactagtgtctgccagttacgatggaactgctcaggtatgggatgttctg
caagaagagccgctcagtaactatcgtgggcacaaagggaggctgctgtctgttcagtgg
tctcctgtggatccagaccaggtgtggacaggagctgatgatttttgccttcataattgg
tctatatcgaaacaggaacatagcaggccccccaaagggaaaaaagccattgattttgaa
aaaaagcgtggccttcaatcaaaaccaaaagccaagaagaagaaaaagttagacacaccc
aaagaggagacagggggggagttactgaagggagaagaggagagccctctaacacagaat
gggacatccgatcaagagcatgggactcctgagccagtggcaactgacaaagacttacat
gaagcagatgtagaacgttcgtctcagttggtcacttctccagttcctgctccagataag
cacagtcccatttcattttctaaggctggacccattaggaaggaccaggccaaagaacga
gcagatttacagaggaagaagaagagtcggtcgttgcttcccatcagcaccagcaaagat
caccgatccaaagaagagcaacacagagactgtgttaagttggcgactgctctctgtgct
aaggatttgaaagagagatctgattctcactcagaggacgcaacgcacctgggattatac
agtgaccgtgcatccctgtatcggcttatggaagaggagggtcaggctcatctcgagaat
gggcaccctgaacttcagcatcagatcatgctttggaaaggggatcttaaggggactttg
caactggctgcagagaggggtgaactgactgaccagttggtggcgctgtcgcccatggct
ggatacaacgtatggctatgggtggttgaagcctttgtgaaacagctgtgctttcaggaa
cagtatgtgaaagctgcttcccacctgctgtccattaataaagtgtatgaagctgtggaa
ctgctcaagggaaaccacctctacagagaagccattgcagttgcaaaggctcggctcctc
cctgatgatccggtcctgcggcagctgtacactggctgggctgcagttctagagcaagat
gggcactattccatggctgctaagtgttatttagggtcttcctctccctatgatgctgcc
aaggtgctggctaaaaaaggggatttgctgtctctgagcactgctgccgaacttgcatta
gttgcaggagaaaaggacctcgctgcttcatttgccatccgctgcgcccaggaactggtc
actgcaaagaactttgtagctgcccaagaagcactgcgacagcatcacagtctactgggg
cagagactgctgttctgtactagtgagctgctgtacactcatttggaggagaagatgccg
gtagattggaaaacacaaagcagcccatgtttccatgaacaaacaggcaatagtaatggg
gaatccttcatggctaagcttagccgtctatggaagagcgtgtgtggagtaaatagcccg
ggacaatacacagatgccttacagcaactgtctgcttcagagattccacagaccacggtc
aatactggccctaaacagctgctgttgcacctttcccatgagatcaccatattatctcta
aattgccagcttaataactgggaagaggctgctccatcactcctccgtgtcctgttccgc
tgtcaccaggcagggcatttcaccctgatgcaggggatagctagactgctgcttcctaac
ggctgtgaagagctgagggctatgttgcccccagaaaacaaagagagcttgactgcctgt
gacagcgtggaggccttccttgcctacataaagatgtatgagatgtggtgggggcagcaa
gaaatgcaaacaaattccaaagaaccagcggctgaagtcaatatggatagtccaaatgga
gaccctgatgccatgcaggaggcagagcaggatataaaaccaagggatatatgtggcttt
gaggtgctgctctcagaccaccatgcacccttccagagtgcccaaagggagatttcagag
gttcaaagagccctccgggagatgatacagcaacaccagaaaattaggcagaacgaggac
agttccttggaactagaaccagagcctgaattaaacacttctccatctcaggataaaact
cccgacagccaagccaatgtatccgcatgtccaagtcccgtgtcactgacagagctcatg
aagaggctttcaacagctaaccataaactagcagagttccctgactatttaaaggcctta
cccttccctgatgtactggagagctgcctggtgctacttcatcttccgtcctatcaaatc
tccccagatatgcgctccagagccttggctctgttgcacagttatgtccctggatcttca
gaccacaagaaagcagccaagaagttcctctccttcccagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (75)   

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