KEGG   Xenopus laevis (African clawed frog): 108710836
Entry
108710836         CDS       T01010                                 
Symbol
cnot8.L
Name
(RefSeq) CCR4-NOT transcription complex subunit 8 isoform X1
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108710836 (cnot8.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108710836 (cnot8.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108710836 (cnot8.L)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     108710836 (cnot8.L)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 108710836
NCBI-ProteinID: XP_018107499
Xenbase: XB-GENE-17345676
UniProt: A0A1L8GWV2 A0A974HS63
Position
3L:complement(28080532..28089442)
AA seq 289 aa
MPAAVVDNSQVICEVWAVNLEEEMRKIRELVRTYGYIAMDTEFPGVVVRPIGEFRSTIDY
QYQLLRCNVDLLKIIQLGLTFTNEKGEYPPGINTWQFNFKFNLTEDMYSQDSIDLLANSG
LQFQKHEEEGIDTLTFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHE
FFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR
MKELFFEDHIDDAKYCGRLYGLGTGVAPKSNEEVEEKISIMSLINNGQQ
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcctgcagcggtggtagataatagccaggtgatatgtgaggtgtgggctgtcaactta
gaggaggagatgcgcaaaattagagaacttgttcgcacatatggctacatagcaatggac
acagagtttcctggtgttgtggtgaggcccatcggtgaattccggagcacaatagattat
cagtatcaactgttgcgctgtaacgttgatcttctgaaaatcattcagcttgggcttact
tttacgaatgaaaagggggagtatccacccggcatcaacacatggcaattcaacttcaag
tttaacctcacggaggatatgtattctcaggattctattgacttgttggctaattctggt
cttcagttccaaaagcacgaagaggaaggcatagacacactgacctttgcagagctgctt
atgacatctggtgtggtgttgtgtgacaatgtgaagtggctttcatttcacagtggctat
gactttggctatatggtgaagcttctcacggattcccgtctgcctgaggaggaacatgag
tttttccatatcttaaatctctttttcccgtctatatatgatgtcaagtatcttatgaag
agctgtaagaacctaaagggaggtcttcaggaggtagctgaccagttggacctgcaaagg
attggtaggcaacatcaagcaggctcagactctctgttgacaggcatggcattcttcagg
atgaaggagttattttttgaagaccacatcgatgatgccaaatattgcggtcgcctctac
ggactgggtacaggagtggctccaaagtccaatgaggaagtggaggagaaaattagcatc
atgtctctaatcaataacgggcagcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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