KEGG   Xenopus laevis (African clawed frog): 397949
Entry
397949            CDS       T01010                                 
Symbol
h2az1.S, H2A.z, H2A.Z1, h2afz, H2Az
Name
(RefSeq) variant histone H2A.Zl1
  KO
K11251  histone H2A
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03082  ATP-dependent chromatin remodeling
xla04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    397949 (h2az1.S)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    397949 (h2az1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    397949 (h2az1.S)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    397949 (h2az1.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    397949 (h2az1.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   397949 (h2az1.S)
SSDB
Motif
Pfam: Histone Histone_H2A_C CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 397949
NCBI-ProteinID: NP_001081609
Xenbase: XB-GENE-17342536
UniProt: P70094 A0A974DTH2
Position
1S:63080566..63084660
AA seq 128 aa
MAGGKAGKDTGKAKATSITRSSRAGLQFPVGRIHRLLKNRTTSHGRVGGTAAVYTAAILE
YLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDALIKATIAGGGVIPHIHKSLIG
KKGQQKTV
NT seq 387 nt   +upstreamnt  +downstreamnt
atggctggaggcaaggctggcaaagataccggaaaagctaaggcaacctctatcacccga
tcctccagagctgggctgcagtttccagttggtcgtatacatagacttctgaaaaacaga
actaccagtcatggacgtgtgggtggtacagcagcagtatatacagctgctattttggaa
tatctgactgctgaggtccttgaattagctggaaatgcttccaaagaccttaaggtaaag
cgtattagtccccgtcacttgcagcttgccattagaggtgatgaagaattggacgctctt
ataaaagcaactattgctggtggtggagtcattccacatatacacaagtcccttattgga
aagaaaggacagcagaaaacagtctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (112)   
   KEGG ORTHOLOGY (1)   
   RefGene (107)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (130)   

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