KEGG   Xenopus laevis (African clawed frog): 398034
Entry
398034            CDS       T01010                                 
Symbol
ykt6.S, snare1, ykt6, ykt6-a, ykt6-b, ykt6a
Name
(RefSeq) synaptobrevin homolog YKT6-A
  KO
K08516  synaptobrevin homolog YKT6
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04130  SNARE interactions in vesicular transport
xla04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    398034 (ykt6.S)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    398034 (ykt6.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    398034 (ykt6.S)
Membrane trafficking [BR:xla04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    398034 (ykt6.S)
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 398034
NCBI-ProteinID: NP_001081758
Xenbase: XB-GENE-949734
UniProt: Q6DDU7
Position
3S:26688951..26704843
AA seq 198 aa
MKLYSLSVLYKGENKVHLLKSAYDVSPFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVK
EQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQY
NALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCDIM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctttacagtctcagtgttctttataagggggaaaacaaggtccatctcctgaaa
agtgcctacgatgtctcccccttcagcttcttccagagatccagtatccaggagtttatg
gcattcaccagccagctgattgtggaacgatcagataaaggaagccggtcgtctgtgaag
gagcaagaatacctgtgtcatgtgtacgtaagaaatgactccctagctggggtggtgatc
gctgataatgaatatcctccaagagtctgcttcaccctgcttgaaaaggtacttgaggaa
ttctctactcaagtagacaggatagactggccatcaggttctcccgccaccattcagtac
aacgctttggattcttacctcagcaagtatcagaaccctcgagatgcagatccaatgagt
aaagtacaggctgagctggatgagaccaaaattatactgcacaacaccatggaatcatta
ttacaacgtggagagaaactggatgacctagtcagtaaatctgaggtcctgggaacacag
tcaaaggccttctacaaaactgcgcggaagcagaactcgtgctgcgacatcatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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