KEGG   Xenopus laevis (African clawed frog): 398711
Entry
398711            CDS       T01010                                 
Symbol
setdb2.S, clld8, setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
  KO
K18494  [histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:2.1.1.355]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla00310  Lysine degradation
xla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xla00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    398711 (setdb2.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    398711 (setdb2.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.355  [histone H3]-lysine9 N-trimethyltransferase
     398711 (setdb2.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     398711 (setdb2.S)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    398711 (setdb2.S)
SSDB
Motif
Pfam: SET Pre-SET MBD
Other DBs
NCBI-GeneID: 398711
NCBI-ProteinID: NP_001082765
Xenbase: XB-GENE-1219036
UniProt: Q6YI93
Position
2S:140860961..140887510
AA seq 699 aa
MEQSANARQSTLRSRTQELNTLSVLSKDVSLEDAKKYWKDRQADGKVDWIFEKVLNKLKI
LWQKIKDGSATNLEYVRAVILVNEAGNLEEDLEEDLQEDTDTIHIDIHKENEVQENTDCS
PERKEDTCLNLNTDCGTDVSGSEPECNSTVSPPAAERVYFGNHSCGPSCLSGINPFLFTK
GNPLQLPISCDFQRCHLKINSPDDLSHILYKAPCGRSLRDYDEVHSYLTETGCHFLAVDN
FSFNNHVRLDSNSSFNQGIVQDCDISNDVESVPVAFSNEIDNTRPSNFIYRKTSWPPGYS
LNNFTDIFVKCCNCTDGCLDILTCSCLQLTAQAFTKCMESSLGIGPLGYKHKRLQEPIPT
GLYECNVSCKCDRMLCQNRVVQHGLKLRLQVFKTNTKGWGVRCLDDVDKGTFVCIYAGRI
LIRTADCTVKSTPDDSVACGNEDHEDSTSTCALILSKRKRKTSHSDSEVTVMHTNPYSMR
SHGLSVHRLSNTFSPRQARSGEREFSLQPLRRPKTKTSMLQKRRRQLIEEGACTVQNSSE
EEGPTPPQSPEQKSSAGTKIQRNENSDETASGYVSEESSSSVISGGHPLEKPISKFKSKL
NKTTVYLSTSPEQTCEENLHFLDASKEGNVGRFLNHSCCPNLFVQQVFVDTHQKCFPWVA
FFTNSVVKAGTELTWDYSYDIGTAADQEIQCLCGQKHAK
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggagcagagtgccaatgctcggcagtcaaccctacgttcccgaacacaagaattaaat
acactatctgttttgtccaaagatgtatcgctcgaagatgcaaagaaatattggaaagat
cgtcaagcggatgggaaagtagactggatatttgagaaagtattgaacaagctcaagatt
ctttggcagaaaatcaaagatgggtcagcaacaaacttagaatatgtaagagctgtgatt
ttggtgaatgaagcaggaaatttagaagaggacttggaagaggacttacaagaggacact
gataccatacacattgatattcacaaggaaaatgaagtgcaggaaaacacagattgttct
ccagaaagaaaggaggacacatgtcttaacctaaatactgattgtgggacagatgtttca
ggttctgagcctgagtgcaacagcacagtttcgcctcctgctgcagagagggtctatttt
ggaaaccattcatgtggcccatcttgtctctctggcattaatccatttctatttacaaaa
ggaaaccctctacaactcccaatctcctgtgactttcagaggtgccatctaaagataaat
agccctgatgacctgtcacatatcctatataaagctccatgtggcagaagcctgagagac
tatgatgaagtgcattcttacctcactgaaactgggtgccactttttagctgtggacaac
ttttctttcaataatcatgttcggttggacagcaattcatctttcaaccaaggaattgtt
caggactgtgatataagcaacgatgtggagtcagtgccagttgcattctccaatgaaatc
gataacacaagaccatctaatttcatctacagaaagacctcttggccaccaggatactcc
ttaaataatttcacagacatctttgtaaaatgctgcaattgcactgatggctgcttagac
atcttaacttgttcatgcctgcaactcacagcacaagcattcacgaaatgtatggaatcg
tccctcggtatcggtcccctaggctataaacacaaaagacttcaagaacctatccctact
ggattatatgaatgtaacgtgtcctgcaagtgtgatcggatgctgtgccagaatcgagtt
gtgcagcacggccttaaactgagactgcaggtcttcaaaacaaatactaagggctggggt
gtccgctgtctggatgatgtagacaaagggacatttgtttgcatctatgcaggaagaata
ctaatcaggacagcagattgtactgtgaaaagcacaccagatgattctgtggcatgtggt
aatgaagatcatgaagatagcacaagtacttgtgctctaatattaagcaaacggaagaga
aagacgtcccattcagactctgaagtcacagttatgcatacaaacccctacagcatgcgc
agccatggattatctgtccatagactatcaaacacattcagtccaagacaggctagatct
ggtgaaagagaattctctttgcagccacttagaagacccaaaacaaagacctccatgctc
caaaagcgtagaaggcagctcattgaagagggagcgtgcacagttcagaacagttcggaa
gaggagggtccaacacctccacaatcgcctgagcagaaatccagtgcaggaaccaaaata
caaagaaatgaaaattctgatgagactgcttcagggtatgtgtcagaggagagcagtagt
tcagttatttctgggggacatcctttagaaaaacccatatccaagtttaagtcaaagcta
aacaaaacgaccgtgtatctatctacctctccggaacagacttgtgaagaaaacttgcat
ttcttagatgcatcgaaagaagggaatgttggacggtttctaaatcacagctgctgtccc
aatctatttgtgcagcaagtatttgtggatacacaccagaaatgttttccgtgggtggca
ttttttactaacagtgtagtaaaagctggaacagaactaacctgggactatagctatgat
attgggactgctgctgatcaggaaatccaatgcctgtgtggtcaaaaacatgcaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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