KEGG   Xenopus laevis (African clawed frog): 432195
Entry
432195            CDS       T01010                                 
Symbol
rad54b.L, fsbp, rad54b, rdh54
Name
(RefSeq) RAD54 homolog B L homeolog
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    432195 (rad54b.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    432195 (rad54b.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     432195 (rad54b.L)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 AAA_34 AAA_22
Other DBs
NCBI-GeneID: 432195
NCBI-ProteinID: NP_001085120
Xenbase: XB-GENE-5839274
UniProt: Q6INQ9
Position
6L:complement(137887784..137927488)
AA seq 895 aa
MRRSAAPSQLCGNPAKKPRFIPPGNVNKTCPDTEMKHSITDLKDKTELSSRAFGRICGLN
TVLHRTEASVVPVCSGKTAIMTSVPVCRSVAVKEHKNEEEESSSFAKYFSVVWCKASKKK
HKKWEGDAILIAKGRAVTLKDMEGKDIGKGTGYKIKDLESLEEGQTLMIGGKEIEVMGII
SPEDYNSGRCFHSVVTSSTSIPSESIQVKPFTNPLKNDSKTTNKDNMFKELQNIKPRHDP
SAPNAFVMPKPSQQHQWAFNKSGLPIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVN
ERFGAILADEMGLGKTLQCISLIWTLLRQGPYGAKPVIKRALIVTPGSLVKNWRKEFQKW
LGTERIRVFAVDQDHKVEEFVNSPLYSVLIISYEMLLRCLEQIESLDFDLVICDEGHRLK
NTSIKTTTSLTSLTCSKRIILSGTPVQNDLQEFFALIEFVNPAVLGSLSTYRKVFEEPIV
RSREPTATPEEKNLGEERAAELARLTGLFILRRTQEVINKFLPPKIENIVFCQPSQFQLD
LYRRLLNSRAVKSCLLGNGENSPHLVCIGALKKLCNHPCLLFRTIQEKSTNPDQGEHSLY
ESIAELFPQDYDGAKISESESGKLLVLSKLLSGIRELSPSERVVLVSHYTQTLNILQALC
VQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGASHLILYDI
DWNPANDIQAMARVWRDGQRRTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKKSE
HIRFSVDELRNLFTLHEDTDCVTHELLECDCIKTNCLSDGLPQKPLIHRSCQLELHRDQL
NKNFSMSELMQWKHFSGQQSTDDPFLQMGKEHISFVFQNTTNIQVNPTSELSPAV
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgcgaagatcggcagccccaagtcaactctgtgggaatccagcaaagaaacctcgcttt
atacctcctggaaatgttaataaaacgtgcccagatacagaaatgaaacattcaataact
gatttgaaggataaaacagaattgtcttcaagagcctttggaagaatatgtggtctgaac
acagtgcttcacaggacagaagcaagtgtggtgccagtgtgcagtggtaaaacagccatt
atgacaagtgttccagtgtgtagatctgtggctgtaaaagaacacaagaatgaggaggaa
gaatccagctcttttgcaaagtatttcagcgtggtttggtgcaaggcctctaagaagaaa
cacaagaagtgggaaggagatgcaatcttaatcgctaaagggagagcagtgacattaaag
gacatggagggaaaagatattggaaaaggtacagggtacaagataaaagacctggaaagc
ctggaagagggccagactctgatgattggtggaaaagagatagaagtcatgggcataatc
tctcctgaagattacaacagtggccgatgtttccactctgtagtgacatcatctacctct
atcccttcagaatccattcaagtgaaacccttcaccaacccattgaaaaatgacagcaag
actactaacaaggacaatatgtttaaagagctacagaatatcaagcctcgccatgatcct
agtgccccaaatgcctttgttatgccaaaaccaagtcagcagcaccagtgggcttttaat
aagtctggcttgccaatcgtagatgtggtggtggatccctatttagctgttcatcttaga
cctcatcagaaggaagggattctctttctttacgaatgtgtaatgggaatgagggttaat
gagcggtttggcgctatccttgccgacgaaatgggtctagggaaaaccctccagtgcatc
tccttgatttggacactcctccgtcagggcccatatggggccaaacctgttataaagaga
gctctcattgtcacgcctggcagtctggtgaagaactggaggaaggaattccagaagtgg
ctgggaacagagcgtatcagagtatttgcagttgaccaggatcacaaagtggaagagttc
gtcaactcccctctttattccgtgctcataataagctatgagatgctgttacgctgtctg
gaacaaatagagagcctagattttgatctagttatttgtgacgagggtcatcgcctaaag
aatacgtctataaaaactacgacctccctgaccagtctaacttgcagcaaacgaatcata
ttgtccgggactccagttcagaatgatctgcaggagttttttgcactgattgagtttgta
aacccagcagttctgggctctttgtccacgtacagaaaagtctttgaggagccaattgtt
aggtctcgggagccaacagcaacacctgaagagaagaatttgggagaagaacgagcagct
gaacttgcaaggctgaccggtctttttatacttagaaggacccaggaggtcataaataaa
ttcctgcctccgaaaatcgaaaacattgtcttctgccaaccatctcaattccagcttgat
ctgtacagaaggcttctgaattcaagggctgttaaatcctgtctgctgggaaatggagaa
aacagcccccacctggtgtgcattggtgcacttaaaaaactatgcaaccatccatgcttg
ctgttcagaactatccaggagaaaagcacaaatcctgatcagggtgaacacagtctgtat
gaaagtatagctgaacttttcccccaggattatgatggtgctaaaatttcagagtccgag
tctggaaaactgctggtcctgagtaagctgctgtctggaatacgggaactcagcccatct
gagagggtggtattggtctcccattatacacagaccctaaacattttgcaagccctgtgc
gttcagcatggatacagttgcacaaggctggatgggcagaccccggttacacagagacag
cacattgtcgatggatttaacagcaaatactcctcagacttcatcttcttgctgagctcc
aaggctgggggcgttggcctcaatctgattggtgcttctcatttaattctgtatgacatt
gactggaatcctgctaatgatatacaggcaatggctcgagtgtggagggatggacagagg
cgcactgtgcatatttacaggcttctcactacaggctcattagaggaaaagatctaccag
aggcagataagtaagcaaggcctgtctggtgctgttgtggacttgacaaagaaatccgag
cacatccgcttctctgtagatgagctgagaaatctatttactttgcatgaagatacagat
tgtgtgactcacgagctgctggaatgtgactgcataaaaacaaactgtctttcagatggt
ttgcctcaaaagccattaatccataggagttgtcagcttgaattacaccgggatcagctt
aataagaatttttccatgtctgagctcatgcagtggaaacatttctccgggcagcagagt
acggatgatccctttctgcaaatgggaaaagaacatatttctttcgtttttcagaacaca
acaaacatccaagtaaacccaacgtcagaactttctcctgccgtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

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