KEGG   Xenopus laevis (African clawed frog): 443807
Entry
443807            CDS       T01010                                 
Symbol
srsf5a.S
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
xla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    443807 (srsf5a.S)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    443807 (srsf5a.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    443807 (srsf5a.S)
Spliceosome [BR:xla03041]
 Common components
  Common spliceosomal components
   SR proteins
    443807 (srsf5a.S)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_occluded Nup35_RRM_2 OB_RNB
Other DBs
NCBI-GeneID: 443807
NCBI-ProteinID: XP_041431192
Xenbase: XB-GENE-6251747
UniProt: A0A1L8EZK9
Position
8S:2824045..2844616
AA seq 261 aa
MSGSRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVEN
LSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYSDMKSALDKLDGVELSGRKI
KLTEDSKKHRSRSRSRSRSRSRSRSKSKSRGSSKSASRSRSKSRTPERKYSQKNNSAEPA
QGSPPPRSKRQSRSSSADSRN
NT seq 786 nt   +upstreamnt  +downstreamnt
atgagcggcagccgtgttttcattgggagactgagtcctcatgccagagagagggatgtg
gagaaattctttaaaggatatggacgcatcagggaaataaatctgaagaatggatttgga
tttgtggagtttgatgatcacagagatgctgacgatgctgtatatgaactgaatggcaaa
gtactgtgcaatgaaagggtgacaattgagcttgcaaggaaccgcagaggaagaggtgga
atgatgggaggtggaggcgggaggtatccaaatcgctttgcttatcgccagtccaatagt
ggtgggcccagtagatatggaccacctgttcgtactgagcacagaattatagtagaaaac
ctctcgtcccgtgtcagttggcaggatctaaaggatttcatgaggaaggccggagaggta
acttatgtggatgcccatcgaagtaacagaaatgagggggttgtggaattcgcatcttat
tctgatatgaagagtgctttagataaactggatggtgtagaactgagtgggcgcaaaatt
aaacttactgaggatagtaagaaacacagaagtagatcaagatcaagatcacgaagtcgc
tcaaggtctcgcagcaagtctaaatctcgcgggtcctccaaatctgcaagtcgatccaga
tccaaaagccgtacacctgagagaaaatactcacagaaaaataactctgcggagccagcg
cagggctccccaccaccacgctccaagcgccaatccagatcaagttcggcagatagtcgt
aattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (58)   

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