KEGG   Xenopus laevis (African clawed frog): 444455
Entry
444455            CDS       T01010                                 
Symbol
scfd1.L, scfd1
Name
(RefSeq) sec1 family domain containing 1 L homeolog
  KO
K19998  sec1 family domain-containing protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    444455 (scfd1.L)
Membrane trafficking [BR:xla04131]
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    444455 (scfd1.L)
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    444455 (scfd1.L)
SSDB
Motif
Pfam: Sec1
Other DBs
NCBI-GeneID: 444455
NCBI-ProteinID: NP_001086026
Xenbase: XB-GENE-941812
UniProt: Q6GN05 A0A974C8T9
Position
8L:105634075..105695974
AA seq 632 aa
MAASIREKQTVALKRMLNFNVPVVKSSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGV
TLHLLLHSDRDAIPDVPAVYFVMPTEENVDRICQDLRTQLYESYYLNFISAISRSKLEDI
ASAALTANTVSHVSKVFDQYLNFITLEDDMFVLCNQNKDLVSYRALNRSDITDTEMETVM
DTIVDSLFCFFVTLGAVPIIRCARGNAAEMVAVKLDKKLRENLRDARNSLFTGDNLGAGQ
FSFQRPLLVLVDRNIDLSTPLHHTWTYQALVHDVLDFHLNRVNLEEAPAVESSPSGARPK
KKNKKSYDLTVADKFWQKHKGSPFPEVAESVQQELESYRTQEDEVKRLKTIMGLEGEDEG
AISMISDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKTRKLDVYFEYEEKLMS
KSNLDKSLLDIISDPDAGTPEDKMRLFLIYYITSAQAPSEVDLEQYRKALEDAGCSLAPL
NYIKQWKAFAKMASAPASYGIGAAKSKGLLSRVMNSGSQLVMEGVKNLVLKQQNLPVTRI
LDSLMEVKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
IKTKQGKHILYGCTELFNATQFVKQLSQLGQK
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggctgcttctatccgggagaagcagacggtggctttaaagcgtatgctgaatttcaat
gttcctgttgtaaagagcagcacaggagaaccagtatggaaggttctcatttacgatcga
tttggccaggacatcatctctccacttctgtcggtgaaggagttaagagacatgggagtc
actttacatttgcttttacattcagatcgtgatgctattccagatgtcccggctgtgtat
tttgtaatgcccacagaggaaaatgtggaccggatatgccaggacctaaggacacagttg
tacgaatcttattatttaaacttcatctcggccatttcccgcagcaaactggaggatatt
gcaagtgcagcattaactgccaacactgtgtctcacgtctcaaaggtttttgaccaatac
ctgaattttattactctagaggatgacatgtttgtgctgtgcaaccaaaacaaggacctg
gtgtcttatcgggctttaaacagatctgatatcacggacacagaaatggaaacagttatg
gacacaattgttgatagccttttctgcttctttgtcacactgggtgctgtgcctattata
agatgtgcaagaggaaatgctgcagaaatggtggcagtgaaacttgataagaaattgaga
gaaaatctgcgagatgccaggaacagcctgtttactggagataacctgggtgctggacaa
ttcagcttccaaagacctttattagtccttgtggacagaaacatagacctgtcgactcct
cttcaccacacatggacatatcaggccctggtgcatgacgttttggatttccacctaaat
cgagtaaatttggaggaagctcctgcagtcgagagcagtccttctggtgcccgacccaaa
aagaagaataagaaatcctacgatcttactgttgcggataagttctggcagaagcacaag
ggcagtccctttccagaagtggcagagtcagtccaacaggagctagaatcttaccgtaca
caggaggacgaagtgaagcggctgaaaacaatcatgggtttagaaggagaagatgaagga
gccatcagtatgatttcagacaatacagcaaagcttacgtcagccgtcagctcccttcct
gagctcctggaaaagaaaagattaatagatctgcataccaatgtggccacagcagtcttg
gaacatatcaagacgcggaagttagatgtctattttgagtatgaagaaaagcttatgagc
aagtctaatttggataaatctcttctggacatcatttctgaccccgatgctggaacacca
gaagacaagatgcggttgttcctgatctattacatcacgtctgcacaggccccttccgag
gtggaccttgaacagtatcgcaaagctttggaagacgcaggctgcagtttggcaccttta
aattatataaagcagtggaaagcttttgccaagatggcatctgcacctgccagctatggg
attggagctgccaaatctaaaggcctgctctcccgagttatgaattcaggctcacagttg
gtgatggaaggtgtgaaaaatctggttctaaagcaacagaatcttccagttaccaggatc
ctggacagtttaatggaagtaaagtctaatccggagactgacgactacagatactttgac
cccaagatgttacggggaaatgacagctctgtcccaagaaacaagaatcctttccaagag
gctattgtgtttgttgtaggaggtggaaactacattgagtaccagaatttagtagactac
atcaagaccaagcaaggaaagcacattctatatggatgcacagaactgttcaatgccaca
cagtttgtgaaacagctatctcaattgggccagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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