KEGG   Xenopus laevis (African clawed frog): 444526
Entry
444526            CDS       T01010                                 
Symbol
pop4.L, pop4, rpp29
Name
(RefSeq) POP4 homolog, ribonuclease P/MRP subunit L homeolog
  KO
K03538  ribonuclease P protein subunit POP4 [EC:3.1.26.5]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    444526 (pop4.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    444526 (pop4.L)
   03016 Transfer RNA biogenesis [BR:xla03016]
    444526 (pop4.L)
   03029 Mitochondrial biogenesis [BR:xla03029]
    444526 (pop4.L)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     444526 (pop4.L)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     444526 (pop4.L)
Transfer RNA biogenesis [BR:xla03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    444526 (pop4.L)
Mitochondrial biogenesis [BR:xla03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    444526 (pop4.L)
SSDB
Motif
Pfam: RNase_P-MRP_p29 BRCC36_C
Other DBs
NCBI-GeneID: 444526
NCBI-ProteinID: NP_001086097
Xenbase: XB-GENE-6254892
UniProt: Q6GM87 A0A974D4T6
Position
4L:68317534..68336504
AA seq 223 aa
MAALIQDDIYKTLPPDEARQLGLELQEPKKAESFVNAFLHHSMPKMKNKSRQEFLDRKAV
VLEYSCKRKERKLNKAKVLTAKERRDMRIFQIKPEQQRYELFLPLHELWTQYIRDLCNGL
RPDAQPQMIQNKLLKADLHGALLTVAKSKCPSYVGLQGIILQETKHVFKFITKDDKLKIV
PKLNCVFSVEIDGFISYIYGSKFQMRASERSAKKFKGKGSIDL
NT seq 672 nt   +upstreamnt  +downstreamnt
atggcggccctgatacaggatgatatatacaagacactacctccagatgaggctcgacaa
ctggggctcgagcttcaggaacccaagaaagcagaatcttttgtaaatgcatttttgcat
cacagtatgccaaaaatgaaaaataaatcgcgtcaagaattcctggatcggaaagcagta
gttttggagtacagttgtaaaaggaaagaaagaaaactgaacaaagctaaagttttaact
gcaaaagaaagaagagatatgagaatatttcaaattaagccagaacagcagaggtatgag
ttgtttctacctttacatgaactgtggacacagtacatccgggacttgtgtaatggactc
aggccagatgcacagcctcaaatgatccagaataaattactcaaggctgacctgcatgga
gcattactaacagttgcaaaatcaaaatgtccctcctatgtaggccttcagggaataatt
cttcaggaaaccaagcatgtattcaagtttattacaaaagatgacaagctaaaaattgtt
cccaagttaaactgcgtctttagtgtggaaattgacggatttatctcttacatctatgga
agcaaatttcagatgagagccagtgaacgctcagccaagaagtttaaaggcaaaggaagc
atagacttgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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