KEGG   Xenopus laevis (African clawed frog): 446520
Entry
446520            CDS       T01010                                 
Symbol
aar2.L, aar2, c20orf4
Name
(RefSeq) AAR2 splicing factor L homeolog
  KO
K13205  A1 cistron-splicing factor AAR2
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    446520 (aar2.L)
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    446520 (aar2.L)
SSDB
Motif
Pfam: AAR2 AAR2_1st Vps52_C
Other DBs
NCBI-GeneID: 446520
NCBI-ProteinID: NP_001086685
Xenbase: XB-GENE-941845
UniProt: Q6DE35 A0A8J0PY72
Position
9_10L:complement(38918194..38923170)
AA seq 395 aa
MDTSSADMDPELARQLFFEGATLVILGVPEGSEFGIDYNSWQVGPRFRGVKMVPPGVHFM
HYNVVGKGGGLGEMSPRSSMFLYLQQRELRLFHWNPQEEEMVVAPHEEAEKLREELQSLD
SFLGPYPYESMRRWVSLSNHIEKETMFRLQPTCGTIFSFPEVLPLEAMTHTADRVQHNLP
RYDSVCQSYKEGMARLPQMKQKEGTEIRFSKIPAKMYPDDATPTEITQHSMDLSYALEQL
LKTHYTGQPLQLLAELQFSFVCFVLGNVYEAFEQWKSLLNLLCRAETFSLQHPELYIKVI
SVLYHQLAQVPTDFFVDIVSQNNFLTSTLQVLFSFLCSPNANPSLRKKAIRFRAHLTKKF
QWDFEEEPDDCAPLIVDLPGGWDCKENPSSQSTAS
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggacacctcctcagcagacatggatcctgaacttgcccggcagctgttttttgaaggt
gcaaccctggtgatcctgggtgtacctgaaggttctgaatttggcattgactacaatagc
tggcaagtgggacctcggtttagaggtgtgaaaatggtgcccccgggtgtacatttcatg
cactacaatgtagttgggaaaggaggagggcttggagagatgagccctcgcagcagcatg
ttcctatatttgcaacagagagagctgcgtcttttccactggaacccccaggaggaagag
atggttgtagccccccatgaagaagcagaaaagctgagggaggagcttcaatccttagac
tctttcctggggccatatccttatgagagcatgcgccgatgggtgtcactcagcaatcac
atcgagaaggagaccatgttcaggctgcaaccaacctgtggcacaatattctcttttcct
gaggtccttcccttggaagccatgacccacactgcagaccgagtccagcataaccttccc
agatatgacagtgtgtgccaaagctataaggagggcatggccaggctgcctcagatgaag
cagaaagagggaacagaaatccgatttagcaagattcctgccaagatgtaccctgatgat
gccacccctacagagatcacccagcacagcatggacctttcctatgctcttgagcagttg
cttaaaacacactacacaggacaacccttgcagctgcttgctgagctgcagttctctttt
gtctgctttgtacttgggaatgtgtatgaagcatttgagcagtggaagagtttgctcaac
cttctgtgccgcgcagagactttttccctgcagcacccagaactctacattaaagttata
tctgtcctgtaccaccagctggcacaagtacccaccgacttctttgttgacattgtatcc
cagaacaacttccttaccagtactctgcaggttctcttctcctttctgtgttcccccaat
gcaaatccctccctcaggaaaaaagctattcgcttccgagctcatctcaccaagaaattc
cagtgggattttgaagaggagcctgatgactgcgcaccccttattgtcgatttgcctgga
ggatgggactgcaaagagaacccttcttcgcaaagcactgcttcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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